Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TSPY9P-201ENST00000440215 945 ntBASIC17.63■□□□□ 0.41
CMTM3Q96MX0 TSPY11P-201ENST00000442607 1045 ntBASIC17.63■□□□□ 0.41
CMTM3Q96MX0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 SMUG1P1-201ENST00000590640 811 ntBASIC17.63■□□□□ 0.41
CMTM3Q96MX0 AL138724.1-201ENST00000606771 1088 ntBASIC17.63■□□□□ 0.41
CMTM3Q96MX0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CMTM3Q96MX0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.62■□□□□ 0.41
CMTM3Q96MX0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CMTM3Q96MX0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 SYT6-210ENST00000641643 1587 ntBASIC17.6■□□□□ 0.41
CMTM3Q96MX0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMTM3Q96MX0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMTM3Q96MX0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms