Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS50Q96JG6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS50Q96JG6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.96■□□□□ 0.79
VPS50Q96JG6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS50Q96JG6 AP001160.3-201ENST00000601484 763 ntBASIC19.96■□□□□ 0.79
VPS50Q96JG6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
VPS50Q96JG6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.96■□□□□ 0.79
VPS50Q96JG6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VPS50Q96JG6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.95■□□□□ 0.79
VPS50Q96JG6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 FEM1AP1-201ENST00000431297 1995 ntBASIC19.95■□□□□ 0.78
VPS50Q96JG6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 AC006970.2-201ENST00000450065 779 ntBASIC19.95■□□□□ 0.78
VPS50Q96JG6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VPS50Q96JG6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.95■□□□□ 0.78
VPS50Q96JG6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 CDCA4P2-201ENST00000441182 718 ntBASIC19.94■□□□□ 0.78
VPS50Q96JG6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 AC138907.5-202ENST00000569484 235 ntBASIC19.94■□□□□ 0.78
VPS50Q96JG6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 AC231657.2-201ENST00000624556 255 ntBASIC19.94■□□□□ 0.78
VPS50Q96JG6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
VPS50Q96JG6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
VPS50Q96JG6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS50Q96JG6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VPS50Q96JG6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS50Q96JG6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.93■□□□□ 0.78
VPS50Q96JG6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS50Q96JG6 AC120498.10-201ENST00000621827 505 ntBASIC19.93■□□□□ 0.78
VPS50Q96JG6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS50Q96JG6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS50Q96JG6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS50Q96JG6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VPS50Q96JG6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS50Q96JG6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS50Q96JG6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS50Q96JG6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VPS50Q96JG6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS50Q96JG6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS50Q96JG6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.92■□□□□ 0.78
VPS50Q96JG6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS50Q96JG6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms