Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC47A1Q96FL8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 MIR572-201ENST00000384983 95 ntBASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 AL136967.2-201ENST00000623968 743 ntBASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC47A1Q96FL8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 AL139246.5-201ENST00000606645 996 ntBASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 BX005040.4-201ENST00000637145 1518 ntBASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC47A1Q96FL8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 AL031432.3-201ENST00000607698 485 ntBASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC47A1Q96FL8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC47A1Q96FL8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC47A1Q96FL8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SLC47A1Q96FL8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC47A1Q96FL8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC47A1Q96FL8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC47A1Q96FL8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.27■□□□□ 0.67
SLC47A1Q96FL8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC47A1Q96FL8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms