Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 AC092666.2-201ENST00000613287 246 ntBASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 PCDHAC2-203ENST00000615316 3011 ntBASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 LINC02228-203ENST00000641970 1355 ntBASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
RAB40AQ8WXH6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.98■□□□□ 0.47
RAB40AQ8WXH6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RAB40AQ8WXH6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 AL162377.1-201ENST00000618844 1793 ntBASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
RAB40AQ8WXH6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB40AQ8WXH6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB40AQ8WXH6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.96■□□□□ 0.46
RAB40AQ8WXH6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
RAB40AQ8WXH6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RAB40AQ8WXH6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
RAB40AQ8WXH6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RAB40AQ8WXH6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.95■□□□□ 0.46
RAB40AQ8WXH6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms