Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
RAB3IL1Q8TBN0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 AC011484.1-201ENST00000377652 1995 ntBASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 AC009237.3-201ENST00000393279 1427 ntBASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 AL512631.2-201ENST00000604634 923 ntBASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3IL1Q8TBN0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3IL1Q8TBN0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3IL1Q8TBN0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3IL1Q8TBN0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3IL1Q8TBN0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB3IL1Q8TBN0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 PCDHAC2-203ENST00000615316 3011 ntBASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB3IL1Q8TBN0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 AC055733.4-201ENST00000638462 1354 ntBASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms