Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 MIR4651-201ENST00000582622 73 ntBASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 AC092118.2-201ENST00000613495 667 ntBASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDND2Q8NHS1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDND2Q8NHS1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.39■□□□□ 0.38
CLDND2Q8NHS1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLDND2Q8NHS1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 LINC01521-201ENST00000504184 1943 ntBASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 AC245052.3-201ENST00000450182 901 ntBASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDND2Q8NHS1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 AC010980.2-201ENST00000587099 1412 ntBASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 AL157384.1-201ENST00000445995 2473 ntBASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDND2Q8NHS1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 RNA5SP413-201ENST00000516373 109 ntBASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDND2Q8NHS1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms