Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC168Q8NDH2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 AC007322.3-201ENST00000426526 701 ntBASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 KRT18P48-201ENST00000434763 852 ntBASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 AC020928.2-201ENST00000588717 2197 ntBASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC168Q8NDH2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC168Q8NDH2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC168Q8NDH2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC168Q8NDH2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC168Q8NDH2 AC092068.2-201ENST00000590491 1708 ntBASIC17.27■□□□□ 0.36
CCDC168Q8NDH2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC168Q8NDH2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC168Q8NDH2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC168Q8NDH2 AC006557.6-201ENST00000623071 864 ntBASIC17.27■□□□□ 0.35
CCDC168Q8NDH2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC168Q8NDH2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC168Q8NDH2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC168Q8NDH2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC168Q8NDH2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC168Q8NDH2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 FITM1-202ENST00000559294 800 ntBASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC168Q8NDH2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 AK4P3-201ENST00000418260 669 ntBASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 C2orf69P3-201ENST00000565542 1120 ntBASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC168Q8NDH2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC168Q8NDH2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms