Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 AC005332.7-201ENST00000614046 2005 ntBASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 OR7E47P-201ENST00000546390 1422 ntBASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 AC026471.6-201ENST00000622954 1905 ntBASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.57■□□□□ 0.56
CROCCP3Q8IVE0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.56■□□□□ 0.56
CROCCP3Q8IVE0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 U85056.1-201ENST00000616429 682 ntBASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CROCCP3Q8IVE0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 KRT18P60-201ENST00000312876 1297 ntBASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CROCCP3Q8IVE0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 PLK5-205ENST00000642079 1969 ntBASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 BHLHE23-202ENST00000612929 1109 ntBASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CROCCP3Q8IVE0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CROCCP3Q8IVE0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms