Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL54Q6P161 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL54Q6P161 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.5■□□□□ 0.07
MRPL54Q6P161 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
MRPL54Q6P161 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL54Q6P161 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.5■□□□□ 0.07
MRPL54Q6P161 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL54Q6P161 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL54Q6P161 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MRPL54Q6P161 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.5■□□□□ 0.07
MRPL54Q6P161 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL54Q6P161 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.5■□□□□ 0.07
MRPL54Q6P161 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL54Q6P161 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
MRPL54Q6P161 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MRPL54Q6P161 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 AL031602.1-201ENST00000633169 911 ntBASIC15.49■□□□□ 0.07
MRPL54Q6P161 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.49■□□□□ 0.07
MRPL54Q6P161 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MRPL54Q6P161 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL54Q6P161 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 FP700111.2-201ENST00000619190 1892 ntBASIC15.48■□□□□ 0.07
MRPL54Q6P161 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL54Q6P161 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL54Q6P161 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL54Q6P161 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL54Q6P161 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL54Q6P161 AL158211.5-201ENST00000623583 2518 ntBASIC15.48■□□□□ 0.07
MRPL54Q6P161 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MRPL54Q6P161 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
MRPL54Q6P161 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 MIR7108-201ENST00000614319 87 ntBASIC15.47■□□□□ 0.07
MRPL54Q6P161 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MRPL54Q6P161 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.47■□□□□ 0.07
MRPL54Q6P161 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
MRPL54Q6P161 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
MRPL54Q6P161 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL54Q6P161 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MRPL54Q6P161 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms