Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF213Q63HN8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF213Q63HN8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF213Q63HN8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 H19-210ENST00000439725 1929 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 PGM5P4-201ENST00000421970 445 ntBASIC11.1□□□□□ -0.63
RNF213Q63HN8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF213Q63HN8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF213Q63HN8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RNF213Q63HN8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF213Q63HN8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RNF213Q63HN8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC11.1□□□□□ -0.63
RNF213Q63HN8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 VENTXP5-201ENST00000523979 775 ntBASIC11.09□□□□□ -0.63
RNF213Q63HN8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RNF213Q63HN8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RNF213Q63HN8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RNF213Q63HN8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RNF213Q63HN8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 AC011558.1-201ENST00000623459 338 ntBASIC11.09□□□□□ -0.63
RNF213Q63HN8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RNF213Q63HN8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 AL035633.1-201ENST00000406139 838 ntBASIC11.09□□□□□ -0.63
RNF213Q63HN8 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RNF213Q63HN8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 AC120498.10-201ENST00000621827 505 ntBASIC11.09□□□□□ -0.63
RNF213Q63HN8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.09□□□□□ -0.63
RNF213Q63HN8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RNF213Q63HN8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
RNF213Q63HN8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 AL353807.1-201ENST00000427475 662 ntBASIC11.08□□□□□ -0.64
RNF213Q63HN8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.08□□□□□ -0.64
RNF213Q63HN8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 LIN28AP1-201ENST00000429574 405 ntBASIC11.08□□□□□ -0.64
RNF213Q63HN8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.08□□□□□ -0.64
RNF213Q63HN8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RNF213Q63HN8 AC116407.4-201ENST00000623319 1061 ntBASIC11.08□□□□□ -0.64
RNF213Q63HN8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RNF213Q63HN8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.07□□□□□ -0.64
RNF213Q63HN8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RNF213Q63HN8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RNF213Q63HN8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RNF213Q63HN8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RNF213Q63HN8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RNF213Q63HN8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC11.07□□□□□ -0.64
RNF213Q63HN8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC11.07□□□□□ -0.64
RNF213Q63HN8 YBX1P2-201ENST00000489612 999 ntBASIC11.07□□□□□ -0.64
RNF213Q63HN8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.07□□□□□ -0.64
RNF213Q63HN8 AC104692.2-201ENST00000603054 253 ntBASIC11.07□□□□□ -0.64
RNF213Q63HN8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
RNF213Q63HN8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RNF213Q63HN8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms