Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 RARRES2P11-201ENST00000635158 484 ntBASIC19.9■□□□□ 0.78
SGO1Q5FBB7 KRT16P2-201ENST00000414673 1423 ntBASIC19.9■□□□□ 0.78
SGO1Q5FBB7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 PCDHAC2-203ENST00000615316 3011 ntBASIC19.9■□□□□ 0.78
SGO1Q5FBB7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SGO1Q5FBB7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
SGO1Q5FBB7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SGO1Q5FBB7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.88■□□□□ 0.77
SGO1Q5FBB7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SGO1Q5FBB7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SGO1Q5FBB7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.86■□□□□ 0.77
SGO1Q5FBB7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms