Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
LINC01554Q52M75 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
LINC01554Q52M75 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 AC018755.3-202ENST00000596210 929 ntBASIC10.28□□□□□ -0.76
LINC01554Q52M75 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 AC141586.5-201ENST00000624546 2050 ntBASIC10.28□□□□□ -0.76
LINC01554Q52M75 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC10.28□□□□□ -0.76
LINC01554Q52M75 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
LINC01554Q52M75 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01554Q52M75 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.76
LINC01554Q52M75 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.76
LINC01554Q52M75 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
LINC01554Q52M75 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.76
LINC01554Q52M75 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01554Q52M75 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01554Q52M75 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01554Q52M75 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
LINC01554Q52M75 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
LINC01554Q52M75 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 GFER-205ENST00000569451 517 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 AC026202.3-201ENST00000600805 1127 ntBASIC10.27□□□□□ -0.77
LINC01554Q52M75 SRP68-213ENST00000629930 165 ntTSL 5 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC10.27□□□□□ -0.77
LINC01554Q52M75 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LINC01554Q52M75 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms