Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
USH1GQ495M9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
USH1GQ495M9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.62■■□□□ 1.37
USH1GQ495M9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
USH1GQ495M9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
USH1GQ495M9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.61■■□□□ 1.37
USH1GQ495M9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USH1GQ495M9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USH1GQ495M9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.61■■□□□ 1.37
USH1GQ495M9 POU5F1P3-201ENST00000428824 1078 ntBASIC23.61■■□□□ 1.37
USH1GQ495M9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.61■■□□□ 1.37
USH1GQ495M9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
USH1GQ495M9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.61■■□□□ 1.37
USH1GQ495M9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.61■■□□□ 1.37
USH1GQ495M9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
USH1GQ495M9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.61■■□□□ 1.37
USH1GQ495M9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.6■■□□□ 1.37
USH1GQ495M9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.6■■□□□ 1.37
USH1GQ495M9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.6■■□□□ 1.37
USH1GQ495M9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.6■■□□□ 1.37
USH1GQ495M9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
USH1GQ495M9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
USH1GQ495M9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
USH1GQ495M9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
USH1GQ495M9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
USH1GQ495M9 FEM1AP4-201ENST00000443167 1987 ntBASIC23.6■■□□□ 1.37
USH1GQ495M9 AC087633.2-202ENST00000565166 1439 ntBASIC23.59■■□□□ 1.37
USH1GQ495M9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
USH1GQ495M9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
USH1GQ495M9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.59■■□□□ 1.37
USH1GQ495M9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USH1GQ495M9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
USH1GQ495M9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.59■■□□□ 1.37
USH1GQ495M9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.59■■□□□ 1.37
USH1GQ495M9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
USH1GQ495M9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.59■■□□□ 1.37
USH1GQ495M9 AL049796.1-201ENST00000565336 1766 ntBASIC23.59■■□□□ 1.37
USH1GQ495M9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
USH1GQ495M9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
USH1GQ495M9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.59■■□□□ 1.37
USH1GQ495M9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.59■■□□□ 1.37
USH1GQ495M9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
USH1GQ495M9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.59■■□□□ 1.37
USH1GQ495M9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USH1GQ495M9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
USH1GQ495M9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
USH1GQ495M9 AC011484.1-201ENST00000377652 1995 ntBASIC23.58■■□□□ 1.37
USH1GQ495M9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
USH1GQ495M9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
USH1GQ495M9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
USH1GQ495M9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.58■■□□□ 1.37
USH1GQ495M9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.58■■□□□ 1.37
USH1GQ495M9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.58■■□□□ 1.37
USH1GQ495M9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.58■■□□□ 1.37
USH1GQ495M9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.58■■□□□ 1.37
USH1GQ495M9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
USH1GQ495M9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.58■■□□□ 1.36
USH1GQ495M9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
USH1GQ495M9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
USH1GQ495M9 AC079834.2-201ENST00000609776 1949 ntBASIC23.57■■□□□ 1.36
USH1GQ495M9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
USH1GQ495M9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.57■■□□□ 1.36
USH1GQ495M9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.57■■□□□ 1.36
USH1GQ495M9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.57■■□□□ 1.36
USH1GQ495M9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.57■■□□□ 1.36
USH1GQ495M9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
USH1GQ495M9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
USH1GQ495M9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
USH1GQ495M9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.56■■□□□ 1.36
USH1GQ495M9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
USH1GQ495M9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.56■■□□□ 1.36
USH1GQ495M9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.56■■□□□ 1.36
USH1GQ495M9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.56■■□□□ 1.36
USH1GQ495M9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
USH1GQ495M9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.56■■□□□ 1.36
USH1GQ495M9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
USH1GQ495M9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms