Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RSPO4Q2I0M5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 AL353807.1-201ENST00000427475 662 ntBASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 CYP21A1P-202ENST00000354927 1481 ntBASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RSPO4Q2I0M5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RSPO4Q2I0M5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RSPO4Q2I0M5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.02■□□□□ 0.79
RSPO4Q2I0M5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 AC007322.3-201ENST00000426526 701 ntBASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 REXO1L10P-201ENST00000615707 1290 ntBASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 AC010947.1-201ENST00000623454 693 ntBASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RSPO4Q2I0M5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RSPO4Q2I0M5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 AL390955.1-201ENST00000428694 934 ntBASIC20■□□□□ 0.79
RSPO4Q2I0M5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 NUDT16P1-203ENST00000513809 620 ntBASIC20■□□□□ 0.79
RSPO4Q2I0M5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20■□□□□ 0.79
RSPO4Q2I0M5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RSPO4Q2I0M5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 AC073195.1-201ENST00000607241 877 ntBASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.99■□□□□ 0.79
RSPO4Q2I0M5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 CRYGFP-201ENST00000418459 633 ntBASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 LIN28AP1-201ENST00000429574 405 ntBASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 AC006011.2-201ENST00000621313 1158 ntBASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.98■□□□□ 0.79
RSPO4Q2I0M5 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 AL390719.1-204ENST00000412397 1219 ntBASIC19.97■□□□□ 0.79
RSPO4Q2I0M5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms