Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YCG1YDR325W 3108 nt3.37□□□□□ -1.87
SSL1Q04673 SEC15YGL233W 2733 nt3.37□□□□□ -1.87
SSL1Q04673 FAS1YKL182W 6156 nt3.37□□□□□ -1.87
SSL1Q04673 RAD2YGR258C 3096 nt3.37□□□□□ -1.87
SSL1Q04673 MSL1YIR009W 336 nt3.37□□□□□ -1.87
SSL1Q04673 RSM19YNR037C 276 nt3.37□□□□□ -1.87
SSL1Q04673 YOR073W-AYOR073W-A 234 nt3.37□□□□□ -1.87
SSL1Q04673 NUP159YIL115C 4383 nt3.36□□□□□ -1.87
SSL1Q04673 TSA2YDR453C 591 nt3.36□□□□□ -1.87
SSL1Q04673 YDR464C-AYDR464C-A 189 nt3.36□□□□□ -1.87
SSL1Q04673 SHE2YKL130C 741 nt3.36□□□□□ -1.87
SSL1Q04673 RPS23BYPR132W 438 nt3.36□□□□□ -1.87
SSL1Q04673 SNX41YDR425W 1878 nt3.36□□□□□ -1.87
SSL1Q04673 NDD1YOR372C 1665 nt3.36□□□□□ -1.87
SSL1Q04673 SNF12YNR023W 1701 nt3.36□□□□□ -1.87
SSL1Q04673 RPA135YPR010C 3612 nt3.35□□□□□ -1.87
SSL1Q04673 RMT2YDR465C 1239 nt3.35□□□□□ -1.87
SSL1Q04673 LCL2YLR104W 396 nt3.35□□□□□ -1.87
SSL1Q04673 YPR108W-AYPR108W-A 213 nt3.35□□□□□ -1.87
SSL1Q04673 DNM1YLL001W 2274 nt3.35□□□□□ -1.87
SSL1Q04673 ATG21YPL100W 1491 nt3.35□□□□□ -1.87
SSL1Q04673 PRP22YER013W 3438 nt3.34□□□□□ -1.87
SSL1Q04673 YER107W-AYER107W-A 321 nt3.34□□□□□ -1.87
SSL1Q04673 RPS23AYGR118W 438 nt3.34□□□□□ -1.87
SSL1Q04673 BAT1YHR208W 1182 nt3.34□□□□□ -1.87
SSL1Q04673 YHR214C-EYHR214C-E 300 nt3.34□□□□□ -1.87
SSL1Q04673 ANB1YJR047C 474 nt3.34□□□□□ -1.87
SSL1Q04673 YAR070CYAR070C 300 nt3.34□□□□□ -1.87
SSL1Q04673 YNL337WYNL337W 255 nt3.34□□□□□ -1.87
SSL1Q04673 YPR010C-AYPR010C-A 219 nt3.34□□□□□ -1.87
SSL1Q04673 SIN3YOL004W 4611 nt3.34□□□□□ -1.88
SSL1Q04673 YPP1YGR198W 2454 nt3.34□□□□□ -1.88
SSL1Q04673 PFK26YIL107C 2484 nt3.34□□□□□ -1.88
SSL1Q04673 REG1YDR028C 3045 nt3.33□□□□□ -1.88
SSL1Q04673 SSM4YIL030C 3960 nt3.33□□□□□ -1.88
SSL1Q04673 PDC2YDR081C 2778 nt3.33□□□□□ -1.88
SSL1Q04673 URM1YIL008W 300 nt3.33□□□□□ -1.88
SSL1Q04673 YJL202CYJL202C 348 nt3.33□□□□□ -1.88
SSL1Q04673 RPS28BYLR264W 204 nt3.33□□□□□ -1.88
SSL1Q04673 FLO9YAL063C 3969 nt3.33□□□□□ -1.88
SSL1Q04673 STN1YDR082W 1485 nt3.33□□□□□ -1.88
SSL1Q04673 TRZ1YKR079C 2517 nt3.33□□□□□ -1.88
SSL1Q04673 VBA4YDR119W 2307 nt3.32□□□□□ -1.88
SSL1Q04673 YDR183C-AYDR183C-A 258 nt3.32□□□□□ -1.88
SSL1Q04673 tM(CAU)Q1tM(CAU)Q1 76 nt3.32□□□□□ -1.88
SSL1Q04673 LSM8YJR022W 330 nt3.32□□□□□ -1.88
SSL1Q04673 YKL183C-AYKL183C-A 213 nt3.32□□□□□ -1.88
SSL1Q04673 YLR031WYLR031W 561 nt3.32□□□□□ -1.88
SSL1Q04673 MNT3YIL014W 1893 nt3.32□□□□□ -1.88
SSL1Q04673 NSP1YJL041W 2472 nt3.32□□□□□ -1.88
SSL1Q04673 BIT61YJL058C 1632 nt3.31□□□□□ -1.88
SSL1Q04673 CAJ1YER048C 1176 nt3.31□□□□□ -1.88
SSL1Q04673 SHH3YMR118C 591 nt3.31□□□□□ -1.88
SSL1Q04673 SSN8YNL025C 972 nt3.31□□□□□ -1.88
SSL1Q04673 RPL9BYNL067W 576 nt3.31□□□□□ -1.88
SSL1Q04673 IMP4YNL075W 873 nt3.31□□□□□ -1.88
SSL1Q04673 RPS7AYOR096W 573 nt3.31□□□□□ -1.88
SSL1Q04673 SHQ1YIL104C 1524 nt3.3□□□□□ -1.88
SSL1Q04673 HMF1YER057C 390 nt3.3□□□□□ -1.88
SSL1Q04673 tT(UGU)Q1tT(UGU)Q1 76 nt3.3□□□□□ -1.88
SSL1Q04673 tW(UCA)QtW(UCA)Q 74 nt3.3□□□□□ -1.88
SSL1Q04673 YOR225WYOR225W 330 nt3.3□□□□□ -1.88
SSL1Q04673 MSH2YOL090W 2895 nt3.3□□□□□ -1.88
SSL1Q04673 TFB1YDR311W 1929 nt3.3□□□□□ -1.88
SSL1Q04673 MSR1YHR091C 1932 nt3.3□□□□□ -1.88
SSL1Q04673 BNI4YNL233W 2679 nt3.3□□□□□ -1.88
SSL1Q04673 SSY1YDR160W 2559 nt3.3□□□□□ -1.88
SSL1Q04673 YAK1YJL141C 2424 nt3.29□□□□□ -1.88
SSL1Q04673 YCR018C-AYCR018C-A 255 nt3.29□□□□□ -1.88
SSL1Q04673 YDL242WYDL242W 354 nt3.29□□□□□ -1.88
SSL1Q04673 tV(CAC)DtV(CAC)D 73 nt3.29□□□□□ -1.88
SSL1Q04673 tV(CAC)HtV(CAC)H 73 nt3.29□□□□□ -1.88
SSL1Q04673 MBB1YJL199C 327 nt3.29□□□□□ -1.88
SSL1Q04673 FCF2YLR051C 654 nt3.29□□□□□ -1.88
SSL1Q04673 IRC23YOR044W 474 nt3.29□□□□□ -1.88
SSL1Q04673 TIM12YBR091C 330 nt3.29□□□□□ -1.88
SSL1Q04673 RRP5YMR229C 5190 nt3.29□□□□□ -1.88
SSL1Q04673 YFR056CYFR056C 369 nt3.28□□□□□ -1.88
SSL1Q04673 COX23YHR116W 456 nt3.28□□□□□ -1.88
SSL1Q04673 TFC1YBR123C 1950 nt3.28□□□□□ -1.88
SSL1Q04673 Q0032Q0032 291 nt3.27□□□□□ -1.89
SSL1Q04673 GCN4YEL009C 846 nt3.27□□□□□ -1.89
SSL1Q04673 SPT4YGR063C 309 nt3.27□□□□□ -1.89
SSL1Q04673 YHR007C-AYHR007C-A 216 nt3.27□□□□□ -1.89
SSL1Q04673 TIM8YJR135W-A 264 nt3.27□□□□□ -1.89
SSL1Q04673 PGA1YNL158W 597 nt3.27□□□□□ -1.89
SSL1Q04673 snR191snR191 274 nt3.27□□□□□ -1.89
SSL1Q04673 YBP1YBR216C 2025 nt3.27□□□□□ -1.89
SSL1Q04673 SMC2YFR031C 3513 nt3.26□□□□□ -1.89
SSL1Q04673 AKR1YDR264C 2295 nt3.26□□□□□ -1.89
SSL1Q04673 APC11YDL008W 498 nt3.26□□□□□ -1.89
SSL1Q04673 PSF1YDR013W 627 nt3.26□□□□□ -1.89
SSL1Q04673 PAU14YIL176C 363 nt3.26□□□□□ -1.89
SSL1Q04673 PAU1YJL223C 363 nt3.26□□□□□ -1.89
SSL1Q04673 YMR122W-AYMR122W-A 255 nt3.26□□□□□ -1.89
SSL1Q04673 JLP2YMR132C 627 nt3.26□□□□□ -1.89
SSL1Q04673 YBL073WYBL073W 312 nt3.26□□□□□ -1.89
SSL1Q04673 SIP3YNL257C 3690 nt3.26□□□□□ -1.89
SSL1Q04673 COX1Q0045 1605 nt3.26□□□□□ -1.89
SSL1Q04673 NOT5YPR072W 1683 nt3.25□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms