Protein–RNA interactions for Protein: P78314

SH3BP2, SH3 domain-binding protein 2, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2P78314 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SH3BP2P78314 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SH3BP2P78314 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SH3BP2P78314 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SH3BP2P78314 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SH3BP2P78314 AC010536.3-201ENST00000620306 533 ntBASIC20.28■□□□□ 0.84
SH3BP2P78314 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.28■□□□□ 0.84
SH3BP2P78314 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH3BP2P78314 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.27■□□□□ 0.84
SH3BP2P78314 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 GABARAPL3-202ENST00000624044 1851 ntBASIC20.27■□□□□ 0.84
SH3BP2P78314 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.27■□□□□ 0.84
SH3BP2P78314 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.27■□□□□ 0.84
SH3BP2P78314 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3BP2P78314 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3BP2P78314 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 AC083906.2-201ENST00000511578 360 ntBASIC20.27■□□□□ 0.84
SH3BP2P78314 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.27■□□□□ 0.84
SH3BP2P78314 AL121832.2-201ENST00000610979 668 ntBASIC20.27■□□□□ 0.84
SH3BP2P78314 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.27■□□□□ 0.84
SH3BP2P78314 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SH3BP2P78314 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH3BP2P78314 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3BP2P78314 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SH3BP2P78314 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SH3BP2P78314 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3BP2P78314 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3BP2P78314 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
SH3BP2P78314 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3BP2P78314 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3BP2P78314 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3BP2P78314 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.25■□□□□ 0.83
SH3BP2P78314 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.25■□□□□ 0.83
SH3BP2P78314 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.25■□□□□ 0.83
SH3BP2P78314 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SH3BP2P78314 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.25■□□□□ 0.83
SH3BP2P78314 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.25■□□□□ 0.83
SH3BP2P78314 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.25■□□□□ 0.83
SH3BP2P78314 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.25■□□□□ 0.83
SH3BP2P78314 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
SH3BP2P78314 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.25■□□□□ 0.83
SH3BP2P78314 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3BP2P78314 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.25■□□□□ 0.83
SH3BP2P78314 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3BP2P78314 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
SH3BP2P78314 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3BP2P78314 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SH3BP2P78314 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3BP2P78314 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3BP2P78314 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.24■□□□□ 0.83
SH3BP2P78314 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3BP2P78314 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3BP2P78314 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3BP2P78314 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SH3BP2P78314 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3BP2P78314 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3BP2P78314 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3BP2P78314 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SH3BP2P78314 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3BP2P78314 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms