Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RPS28P62857 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC12.01□□□□□ -0.49
RPS28P62857 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 LSR-205ENST00000427250 1606 ntTSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RPS28P62857 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.01□□□□□ -0.49
RPS28P62857 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
RPS28P62857 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RPS28P62857 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC12.01□□□□□ -0.49
RPS28P62857 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPS28P62857 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC12□□□□□ -0.49
RPS28P62857 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RPS28P62857 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12□□□□□ -0.49
RPS28P62857 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12□□□□□ -0.49
RPS28P62857 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12□□□□□ -0.49
RPS28P62857 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12□□□□□ -0.49
RPS28P62857 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC12□□□□□ -0.49
RPS28P62857 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RPS28P62857 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RPS28P62857 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
RPS28P62857 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RPS28P62857 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC12□□□□□ -0.49
RPS28P62857 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12□□□□□ -0.49
RPS28P62857 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12□□□□□ -0.49
RPS28P62857 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC12□□□□□ -0.49
RPS28P62857 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RPS28P62857 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC11.99□□□□□ -0.49
RPS28P62857 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC11.99□□□□□ -0.49
RPS28P62857 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RPS28P62857 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
RPS28P62857 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
RPS28P62857 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RPS28P62857 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC11.99□□□□□ -0.49
RPS28P62857 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC11.99□□□□□ -0.49
RPS28P62857 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RPS28P62857 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms