Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
CLNS1AP54105 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CLNS1AP54105 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLNS1AP54105 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.31■□□□□ 0.84
CLNS1AP54105 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CLNS1AP54105 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.31■□□□□ 0.84
CLNS1AP54105 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.31■□□□□ 0.84
CLNS1AP54105 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.31■□□□□ 0.84
CLNS1AP54105 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.31■□□□□ 0.84
CLNS1AP54105 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.31■□□□□ 0.84
CLNS1AP54105 AC011298.3-201ENST00000615796 283 ntBASIC20.31■□□□□ 0.84
CLNS1AP54105 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CLNS1AP54105 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLNS1AP54105 LTB4R2-202ENST00000528054 3092 ntBASIC20.3■□□□□ 0.84
CLNS1AP54105 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.3■□□□□ 0.84
CLNS1AP54105 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.3■□□□□ 0.84
CLNS1AP54105 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLNS1AP54105 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.3■□□□□ 0.84
CLNS1AP54105 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
CLNS1AP54105 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.3■□□□□ 0.84
CLNS1AP54105 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.3■□□□□ 0.84
CLNS1AP54105 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.3■□□□□ 0.84
CLNS1AP54105 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.3■□□□□ 0.84
CLNS1AP54105 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
CLNS1AP54105 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLNS1AP54105 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLNS1AP54105 AP004607.7-201ENST00000527152 1677 ntBASIC20.29■□□□□ 0.84
CLNS1AP54105 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.29■□□□□ 0.84
CLNS1AP54105 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
CLNS1AP54105 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.29■□□□□ 0.84
CLNS1AP54105 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.29■□□□□ 0.84
CLNS1AP54105 AL356441.2-201ENST00000443009 864 ntBASIC20.29■□□□□ 0.84
CLNS1AP54105 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.29■□□□□ 0.84
CLNS1AP54105 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.29■□□□□ 0.84
CLNS1AP54105 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLNS1AP54105 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLNS1AP54105 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLNS1AP54105 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLNS1AP54105 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLNS1AP54105 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.28■□□□□ 0.84
CLNS1AP54105 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 TNXA-203ENST00000507684 2038 ntBASIC20.28■□□□□ 0.84
CLNS1AP54105 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.28■□□□□ 0.84
CLNS1AP54105 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLNS1AP54105 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.28■□□□□ 0.84
CLNS1AP54105 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLNS1AP54105 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.28■□□□□ 0.84
CLNS1AP54105 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLNS1AP54105 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.28■□□□□ 0.84
CLNS1AP54105 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLNS1AP54105 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLNS1AP54105 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.27■□□□□ 0.84
CLNS1AP54105 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLNS1AP54105 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.27■□□□□ 0.84
CLNS1AP54105 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLNS1AP54105 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.27■□□□□ 0.84
CLNS1AP54105 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLNS1AP54105 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.27■□□□□ 0.84
CLNS1AP54105 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLNS1AP54105 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLNS1AP54105 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms