Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
NEK4P51957 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.43■■□□□ 1.5
NEK4P51957 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.43■■□□□ 1.5
NEK4P51957 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.42■■□□□ 1.5
NEK4P51957 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NEK4P51957 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NEK4P51957 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.42■■□□□ 1.5
NEK4P51957 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NEK4P51957 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.42■■□□□ 1.5
NEK4P51957 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NEK4P51957 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NEK4P51957 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.42■■□□□ 1.5
NEK4P51957 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.42■■□□□ 1.5
NEK4P51957 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NEK4P51957 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.41■■□□□ 1.5
NEK4P51957 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NEK4P51957 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NEK4P51957 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
NEK4P51957 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.41■■□□□ 1.5
NEK4P51957 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NEK4P51957 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.41■■□□□ 1.5
NEK4P51957 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.41■■□□□ 1.5
NEK4P51957 DUX4L2-201ENST00000561772 1275 ntBASIC24.41■■□□□ 1.5
NEK4P51957 AP001160.3-201ENST00000601484 763 ntBASIC24.41■■□□□ 1.5
NEK4P51957 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.41■■□□□ 1.5
NEK4P51957 DUX4L6-201ENST00000626483 1275 ntBASIC24.41■■□□□ 1.5
NEK4P51957 DUX4L1-201ENST00000627662 1275 ntBASIC24.41■■□□□ 1.5
NEK4P51957 DUX4L8-201ENST00000629013 1275 ntBASIC24.41■■□□□ 1.5
NEK4P51957 DUX4L3-201ENST00000630187 1275 ntBASIC24.41■■□□□ 1.5
NEK4P51957 DUX4L7-201ENST00000630678 1275 ntBASIC24.41■■□□□ 1.5
NEK4P51957 DUX4L5-201ENST00000630834 1275 ntBASIC24.41■■□□□ 1.5
NEK4P51957 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NEK4P51957 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
NEK4P51957 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC24.41■■□□□ 1.5
NEK4P51957 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NEK4P51957 AC099778.1-201ENST00000568593 1911 ntBASIC24.41■■□□□ 1.5
NEK4P51957 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NEK4P51957 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NEK4P51957 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.4■■□□□ 1.5
NEK4P51957 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.4■■□□□ 1.5
NEK4P51957 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
NEK4P51957 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NEK4P51957 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
NEK4P51957 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
NEK4P51957 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.4■■□□□ 1.5
NEK4P51957 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
NEK4P51957 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NEK4P51957 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
NEK4P51957 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NEK4P51957 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.4■■□□□ 1.5
NEK4P51957 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NEK4P51957 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NEK4P51957 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
NEK4P51957 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.39■■□□□ 1.5
NEK4P51957 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NEK4P51957 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.39■■□□□ 1.49
NEK4P51957 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.39■■□□□ 1.49
NEK4P51957 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NEK4P51957 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NEK4P51957 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NEK4P51957 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
NEK4P51957 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NEK4P51957 AC092720.2-201ENST00000602388 1665 ntBASIC24.38■■□□□ 1.49
NEK4P51957 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.38■■□□□ 1.49
NEK4P51957 AC123595.1-201ENST00000440769 1046 ntBASIC24.38■■□□□ 1.49
NEK4P51957 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.38■■□□□ 1.49
NEK4P51957 TERF1P2-201ENST00000583350 1212 ntBASIC24.38■■□□□ 1.49
NEK4P51957 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.38■■□□□ 1.49
NEK4P51957 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
NEK4P51957 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NEK4P51957 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
NEK4P51957 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NEK4P51957 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
NEK4P51957 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
NEK4P51957 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.37■■□□□ 1.49
NEK4P51957 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 AC116050.2-201ENST00000612102 1779 ntBASIC24.37■■□□□ 1.49
NEK4P51957 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.37■■□□□ 1.49
NEK4P51957 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.37■■□□□ 1.49
NEK4P51957 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.37■■□□□ 1.49
NEK4P51957 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.37■■□□□ 1.49
NEK4P51957 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
NEK4P51957 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
NEK4P51957 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
NEK4P51957 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
NEK4P51957 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
NEK4P51957 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.36■■□□□ 1.49
NEK4P51957 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
NEK4P51957 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NEK4P51957 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.36■■□□□ 1.49
NEK4P51957 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
NEK4P51957 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms