Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.37■□□□□ 0.69
CLK3P49761 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.37■□□□□ 0.69
CLK3P49761 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.37■□□□□ 0.69
CLK3P49761 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLK3P49761 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.37■□□□□ 0.69
CLK3P49761 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
CLK3P49761 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
CLK3P49761 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLK3P49761 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CLK3P49761 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.36■□□□□ 0.69
CLK3P49761 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.36■□□□□ 0.69
CLK3P49761 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 AC120498.10-201ENST00000621827 505 ntBASIC19.36■□□□□ 0.69
CLK3P49761 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CLK3P49761 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CLK3P49761 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK3P49761 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.35■□□□□ 0.69
CLK3P49761 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.35■□□□□ 0.69
CLK3P49761 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CLK3P49761 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.35■□□□□ 0.69
CLK3P49761 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.35■□□□□ 0.69
CLK3P49761 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.35■□□□□ 0.69
CLK3P49761 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.35■□□□□ 0.69
CLK3P49761 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.35■□□□□ 0.69
CLK3P49761 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLK3P49761 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK3P49761 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.34■□□□□ 0.69
CLK3P49761 AFG3L1P-217ENST00000557444 2447 ntBASIC19.34■□□□□ 0.69
CLK3P49761 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
CLK3P49761 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 AC006128.1-201ENST00000624704 1661 ntBASIC19.34■□□□□ 0.69
CLK3P49761 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLK3P49761 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.34■□□□□ 0.69
CLK3P49761 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLK3P49761 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.34■□□□□ 0.69
CLK3P49761 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CLK3P49761 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.34■□□□□ 0.69
CLK3P49761 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLK3P49761 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLK3P49761 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLK3P49761 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.34■□□□□ 0.69
CLK3P49761 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLK3P49761 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.34■□□□□ 0.69
CLK3P49761 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLK3P49761 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLK3P49761 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.33■□□□□ 0.69
CLK3P49761 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLK3P49761 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms