Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.97■□□□□ 0.95
GRIA4P48058 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.97■□□□□ 0.95
GRIA4P48058 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
GRIA4P48058 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.97■□□□□ 0.95
GRIA4P48058 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 AL512625.2-201ENST00000417533 625 ntBASIC20.97■□□□□ 0.95
GRIA4P48058 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 AC245052.3-201ENST00000450182 901 ntBASIC20.97■□□□□ 0.95
GRIA4P48058 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.97■□□□□ 0.95
GRIA4P48058 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
GRIA4P48058 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.97■□□□□ 0.95
GRIA4P48058 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
GRIA4P48058 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GRIA4P48058 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA4P48058 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA4P48058 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA4P48058 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA4P48058 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GRIA4P48058 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.96■□□□□ 0.95
GRIA4P48058 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.96■□□□□ 0.95
GRIA4P48058 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.96■□□□□ 0.95
GRIA4P48058 AC243732.1-201ENST00000612648 864 ntBASIC20.96■□□□□ 0.95
GRIA4P48058 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GRIA4P48058 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.96■□□□□ 0.95
GRIA4P48058 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
GRIA4P48058 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
GRIA4P48058 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
GRIA4P48058 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.95■□□□□ 0.94
GRIA4P48058 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 AC092118.2-201ENST00000613495 667 ntBASIC20.95■□□□□ 0.94
GRIA4P48058 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GRIA4P48058 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.95■□□□□ 0.94
GRIA4P48058 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 AC073130.3-201ENST00000624389 2278 ntBASIC20.95■□□□□ 0.94
GRIA4P48058 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
GRIA4P48058 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GRIA4P48058 RBM17P2-201ENST00000616397 1405 ntBASIC20.95■□□□□ 0.94
GRIA4P48058 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
GRIA4P48058 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.94■□□□□ 0.94
GRIA4P48058 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA4P48058 POU5F1P3-201ENST00000428824 1078 ntBASIC20.94■□□□□ 0.94
GRIA4P48058 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA4P48058 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.94■□□□□ 0.94
GRIA4P48058 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
GRIA4P48058 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.94■□□□□ 0.94
GRIA4P48058 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.94■□□□□ 0.94
GRIA4P48058 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.94■□□□□ 0.94
GRIA4P48058 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.94■□□□□ 0.94
GRIA4P48058 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
GRIA4P48058 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GRIA4P48058 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GRIA4P48058 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
GRIA4P48058 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GRIA4P48058 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.93■□□□□ 0.94
GRIA4P48058 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA4P48058 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.93■□□□□ 0.94
GRIA4P48058 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GRIA4P48058 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.93■□□□□ 0.94
GRIA4P48058 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
GRIA4P48058 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA4P48058 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA4P48058 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.93■□□□□ 0.94
GRIA4P48058 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.93■□□□□ 0.94
GRIA4P48058 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.93■□□□□ 0.94
GRIA4P48058 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA4P48058 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
GRIA4P48058 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA4P48058 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA4P48058 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GRIA4P48058 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA4P48058 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA4P48058 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GRIA4P48058 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.93■□□□□ 0.94
GRIA4P48058 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA4P48058 AL049796.1-201ENST00000565336 1766 ntBASIC20.92■□□□□ 0.94
GRIA4P48058 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.92■□□□□ 0.94
GRIA4P48058 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
GRIA4P48058 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA4P48058 AL157384.1-201ENST00000445995 2473 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms