Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 ECM5YMR176W 4236 nt1.7□□□□□ -2.14
LSM4P40070 YCR108CYCR108C 192 nt1.7□□□□□ -2.14
LSM4P40070 YEA4YEL004W 1029 nt1.7□□□□□ -2.14
LSM4P40070 YER158W-AYER158W-A 216 nt1.7□□□□□ -2.14
LSM4P40070 YPS5YGL259W 498 nt1.7□□□□□ -2.14
LSM4P40070 MVB12YGR206W 306 nt1.7□□□□□ -2.14
LSM4P40070 TPK3YKL166C 1197 nt1.7□□□□□ -2.14
LSM4P40070 UBR2YLR024C 5619 nt1.7□□□□□ -2.14
LSM4P40070 YNL089CYNL089C 477 nt1.7□□□□□ -2.14
LSM4P40070 YBR277CYBR277C 402 nt1.7□□□□□ -2.14
LSM4P40070 SMC6YLR383W 3345 nt1.69□□□□□ -2.14
LSM4P40070 FUS2YMR232W 2034 nt1.69□□□□□ -2.14
LSM4P40070 ASI3YNL008C 2031 nt1.69□□□□□ -2.14
LSM4P40070 YPR089WYPR089W 2667 nt1.69□□□□□ -2.14
LSM4P40070 SLU7YDR088C 1149 nt1.69□□□□□ -2.14
LSM4P40070 SLD5YDR489W 885 nt1.69□□□□□ -2.14
LSM4P40070 YFL012WYFL012W 447 nt1.69□□□□□ -2.14
LSM4P40070 YGR226CYGR226C 210 nt1.69□□□□□ -2.14
LSM4P40070 GRE2YOL151W 1029 nt1.69□□□□□ -2.14
LSM4P40070 MSS18YPR134W 807 nt1.69□□□□□ -2.14
LSM4P40070 RTT101YJL047C 2529 nt1.69□□□□□ -2.14
LSM4P40070 RAD18YCR066W 1464 nt1.69□□□□□ -2.14
LSM4P40070 SSP1YHR184W 1716 nt1.69□□□□□ -2.14
LSM4P40070 ATG9YDL149W 2994 nt1.68□□□□□ -2.14
LSM4P40070 CDC37YDR168W 1521 nt1.68□□□□□ -2.14
LSM4P40070 GPM2YDL021W 936 nt1.68□□□□□ -2.14
LSM4P40070 tT(UGU)HtT(UGU)H 72 nt1.68□□□□□ -2.14
LSM4P40070 CAP1YKL007W 807 nt1.68□□□□□ -2.14
LSM4P40070 YPT52YKR014C 705 nt1.68□□□□□ -2.14
LSM4P40070 RLP24YLR009W 600 nt1.68□□□□□ -2.14
LSM4P40070 YLR379WYLR379W 375 nt1.68□□□□□ -2.14
LSM4P40070 URA5YML106W 681 nt1.68□□□□□ -2.14
LSM4P40070 ATX1YNL259C 222 nt1.68□□□□□ -2.14
LSM4P40070 BRX1YOL077C 876 nt1.68□□□□□ -2.14
LSM4P40070 POP7YBR167C 423 nt1.68□□□□□ -2.14
LSM4P40070 NTC20YBR188C 423 nt1.68□□□□□ -2.14
LSM4P40070 LYS9YNR050C 1341 nt1.67□□□□□ -2.14
LSM4P40070 DFG16YOR030W 1860 nt1.67□□□□□ -2.14
LSM4P40070 BAS1YKR099W 2436 nt1.67□□□□□ -2.14
LSM4P40070 VPH1YOR270C 2523 nt1.67□□□□□ -2.14
LSM4P40070 YCR081C-AYCR081C-A 237 nt1.67□□□□□ -2.14
LSM4P40070 YGR115CYGR115C 780 nt1.67□□□□□ -2.14
LSM4P40070 YNL050CYNL050C 813 nt1.67□□□□□ -2.14
LSM4P40070 CSI2YOL007C 1026 nt1.67□□□□□ -2.14
LSM4P40070 MGA2YIR033W 3342 nt1.67□□□□□ -2.14
LSM4P40070 RRP6YOR001W 2202 nt1.67□□□□□ -2.14
LSM4P40070 SLK19YOR195W 2466 nt1.66□□□□□ -2.14
LSM4P40070 KEI1YDR367W 666 nt1.66□□□□□ -2.14
LSM4P40070 LOC1YFR001W 615 nt1.66□□□□□ -2.14
LSM4P40070 RPL11BYGR085C 525 nt1.66□□□□□ -2.14
LSM4P40070 PCL5YHR071W 690 nt1.66□□□□□ -2.14
LSM4P40070 LIN1YHR156C 1023 nt1.66□□□□□ -2.14
LSM4P40070 SYM1YLR251W 594 nt1.66□□□□□ -2.14
LSM4P40070 RPL11AYPR102C 525 nt1.66□□□□□ -2.14
LSM4P40070 MUD1YBR119W 897 nt1.66□□□□□ -2.14
LSM4P40070 MFB1YDR219C 1398 nt1.66□□□□□ -2.14
LSM4P40070 RNH70YGR276C 1662 nt1.66□□□□□ -2.14
LSM4P40070 IRC20YLR247C 4671 nt1.66□□□□□ -2.14
LSM4P40070 RTT107YHR154W 3213 nt1.65□□□□□ -2.14
LSM4P40070 YDL158CYDL158C 309 nt1.65□□□□□ -2.15
LSM4P40070 YDR262WYDR262W 819 nt1.65□□□□□ -2.15
LSM4P40070 RSM28YDR494W 1086 nt1.65□□□□□ -2.15
LSM4P40070 YGL109WYGL109W 324 nt1.65□□□□□ -2.15
LSM4P40070 TAD1YGL243W 1203 nt1.65□□□□□ -2.15
LSM4P40070 YJL147CYJL147C 1149 nt1.65□□□□□ -2.15
LSM4P40070 TMA7YLR262C-A 195 nt1.65□□□□□ -2.15
LSM4P40070 GIM5YML094W 492 nt1.65□□□□□ -2.15
LSM4P40070 YPL119C-AYPL119C-A 264 nt1.65□□□□□ -2.15
LSM4P40070 CUR1YPR158W 759 nt1.65□□□□□ -2.15
LSM4P40070 LST4YKL176C 2487 nt1.65□□□□□ -2.15
LSM4P40070 YIL166CYIL166C 1629 nt1.65□□□□□ -2.15
LSM4P40070 YLR035C-AYLR035C-A 3468 nt1.65□□□□□ -2.15
LSM4P40070 REV1YOR346W 2958 nt1.65□□□□□ -2.15
LSM4P40070 BUD2YKL092C 3315 nt1.64□□□□□ -2.15
LSM4P40070 SNA4YDL123W 423 nt1.64□□□□□ -2.15
LSM4P40070 IRC4YDR540C 540 nt1.64□□□□□ -2.15
LSM4P40070 YGL014C-AYGL014C-A 162 nt1.64□□□□□ -2.15
LSM4P40070 EST3YIL009C-A 546 nt1.64□□□□□ -2.15
LSM4P40070 YAL016C-BYAL016C-B 186 nt1.64□□□□□ -2.15
LSM4P40070 YJL133C-AYJL133C-A 225 nt1.64□□□□□ -2.15
LSM4P40070 YMR144WYMR144W 1029 nt1.64□□□□□ -2.15
LSM4P40070 MF(ALPHA)1YPL187W 498 nt1.64□□□□□ -2.15
LSM4P40070 SUS1YBR111W-A 291 nt1.64□□□□□ -2.15
LSM4P40070 SIR4YDR227W 4077 nt1.64□□□□□ -2.15
LSM4P40070 TRL1YJL087C 2484 nt1.64□□□□□ -2.15
LSM4P40070 MYO2YOR326W 4725 nt1.64□□□□□ -2.15
LSM4P40070 BFR1YOR198C 1413 nt1.64□□□□□ -2.15
LSM4P40070 CTF4YPR135W 2784 nt1.64□□□□□ -2.15
LSM4P40070 RTP1YMR185W 2946 nt1.63□□□□□ -2.15
LSM4P40070 YCR013CYCR013C 648 nt1.63□□□□□ -2.15
LSM4P40070 MIC19YFR011C 513 nt1.63□□□□□ -2.15
LSM4P40070 PGD1YGL025C 1194 nt1.63□□□□□ -2.15
LSM4P40070 COX13YGL191W 390 nt1.63□□□□□ -2.15
LSM4P40070 THG1YGR024C 714 nt1.63□□□□□ -2.15
LSM4P40070 YHR050W-AYHR050W-A 171 nt1.63□□□□□ -2.15
LSM4P40070 YET1YKL065C 621 nt1.63□□□□□ -2.15
LSM4P40070 NBP1YLR457C 960 nt1.63□□□□□ -2.15
LSM4P40070 YMR247W-AYMR247W-A 144 nt1.63□□□□□ -2.15
LSM4P40070 YBR063CYBR063C 1215 nt1.63□□□□□ -2.15
LSM4P40070 ADF1YCL058W-A 342 nt1.63□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 33.5 ms