Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 BUD2YKL092C 3315 nt2.09□□□□□ -2.07
MRPL40P36534 SPP41YDR464W 4308 nt2.09□□□□□ -2.07
MRPL40P36534 YFR056CYFR056C 369 nt2.09□□□□□ -2.07
MRPL40P36534 YAL059C-AYAL059C-A 423 nt2.09□□□□□ -2.07
MRPL40P36534 RPF2YKR081C 1035 nt2.09□□□□□ -2.07
MRPL40P36534 YOL038C-AYOL038C-A 96 nt2.09□□□□□ -2.07
MRPL40P36534 NSL1YPL233W 651 nt2.09□□□□□ -2.07
MRPL40P36534 SUS1YBR111W-A 291 nt2.09□□□□□ -2.07
MRPL40P36534 GEP7YGL057C 864 nt2.08□□□□□ -2.08
MRPL40P36534 VMA7YGR020C 357 nt2.08□□□□□ -2.08
MRPL40P36534 VPS8YAL002W 3825 nt2.08□□□□□ -2.08
MRPL40P36534 SHE2YKL130C 741 nt2.08□□□□□ -2.08
MRPL40P36534 VPS63YLR261C 327 nt2.08□□□□□ -2.08
MRPL40P36534 YOL159C-AYOL159C-A 273 nt2.08□□□□□ -2.08
MRPL40P36534 UBP2YOR124C 3819 nt2.08□□□□□ -2.08
MRPL40P36534 SPR2YOR214C 711 nt2.08□□□□□ -2.08
MRPL40P36534 ASG1YIL130W 2895 nt2.08□□□□□ -2.08
MRPL40P36534 LEU3YLR451W 2661 nt2.08□□□□□ -2.08
MRPL40P36534 ATG9YDL149W 2994 nt2.07□□□□□ -2.08
MRPL40P36534 UFD4YKL010C 4452 nt2.07□□□□□ -2.08
MRPL40P36534 FMP16YDR070C 282 nt2.07□□□□□ -2.08
MRPL40P36534 GPI8YDR331W 1236 nt2.07□□□□□ -2.08
MRPL40P36534 YIR018C-AYIR018C-A 138 nt2.07□□□□□ -2.08
MRPL40P36534 YKR051WYKR051W 1257 nt2.07□□□□□ -2.08
MRPL40P36534 YNR021WYNR021W 1215 nt2.07□□□□□ -2.08
MRPL40P36534 YOL150CYOL150C 312 nt2.07□□□□□ -2.08
MRPL40P36534 YCL007CYCL007C 393 nt2.07□□□□□ -2.08
MRPL40P36534 YNL034WYNL034W 1839 nt2.07□□□□□ -2.08
MRPL40P36534 NOP14YDL148C 2433 nt2.07□□□□□ -2.08
MRPL40P36534 TRL1YJL087C 2484 nt2.07□□□□□ -2.08
MRPL40P36534 NIC96YFR002W 2520 nt2.07□□□□□ -2.08
MRPL40P36534 PEP1YBL017C 4740 nt2.06□□□□□ -2.08
MRPL40P36534 ECM5YMR176W 4236 nt2.06□□□□□ -2.08
MRPL40P36534 YFR016CYFR016C 3702 nt2.06□□□□□ -2.08
MRPL40P36534 YCR013CYCR013C 648 nt2.06□□□□□ -2.08
MRPL40P36534 UBC5YDR059C 447 nt2.06□□□□□ -2.08
MRPL40P36534 DAD4YDR320C-A 219 nt2.06□□□□□ -2.08
MRPL40P36534 AIM19YIL087C 474 nt2.06□□□□□ -2.08
MRPL40P36534 ATG38YLR211C 681 nt2.06□□□□□ -2.08
MRPL40P36534 GIM3YNL153C 390 nt2.06□□□□□ -2.08
MRPL40P36534 SAG1YJR004C 1953 nt2.06□□□□□ -2.08
MRPL40P36534 FKS1YLR342W 5631 nt2.06□□□□□ -2.08
MRPL40P36534 KAR9YPL269W 1935 nt2.05□□□□□ -2.08
MRPL40P36534 REV1YOR346W 2958 nt2.05□□□□□ -2.08
MRPL40P36534 NCB2YDR397C 441 nt2.05□□□□□ -2.08
MRPL40P36534 SIP18YMR175W 240 nt2.05□□□□□ -2.08
MRPL40P36534 MED8YBR193C 672 nt2.05□□□□□ -2.08
MRPL40P36534 STD1YOR047C 1335 nt2.05□□□□□ -2.08
MRPL40P36534 UBP11YKR098C 2154 nt2.05□□□□□ -2.08
MRPL40P36534 YHR214C-BYHR214C-B 5382 nt2.04□□□□□ -2.08
MRPL40P36534 RSM28YDR494W 1086 nt2.04□□□□□ -2.08
MRPL40P36534 YER172C-AYER172C-A 381 nt2.04□□□□□ -2.08
MRPL40P36534 YFR057WYFR057W 456 nt2.04□□□□□ -2.08
MRPL40P36534 YGL165CYGL165C 579 nt2.04□□□□□ -2.08
MRPL40P36534 RSM27YGR215W 333 nt2.04□□□□□ -2.08
MRPL40P36534 YGR242WYGR242W 309 nt2.04□□□□□ -2.08
MRPL40P36534 YIL058WYIL058W 285 nt2.04□□□□□ -2.08
MRPL40P36534 YBL068W-AYBL068W-A 237 nt2.04□□□□□ -2.08
MRPL40P36534 ARL3YPL051W 597 nt2.04□□□□□ -2.08
MRPL40P36534 YPL119C-AYPL119C-A 264 nt2.04□□□□□ -2.08
MRPL40P36534 COX3Q0275 810 nt2.03□□□□□ -2.08
MRPL40P36534 YJL086CYJL086C 369 nt2.03□□□□□ -2.08
MRPL40P36534 ATX2YOR079C 942 nt2.03□□□□□ -2.08
MRPL40P36534 YPL039WYPL039W 951 nt2.03□□□□□ -2.08
MRPL40P36534 MF(ALPHA)1YPL187W 498 nt2.03□□□□□ -2.08
MRPL40P36534 PDR8YLR266C 2106 nt2.03□□□□□ -2.08
MRPL40P36534 MPH1YIR002C 2982 nt2.03□□□□□ -2.08
MRPL40P36534 PTC5YOR090C 1719 nt2.03□□□□□ -2.09
MRPL40P36534 NCS2YNL119W 1482 nt2.02□□□□□ -2.09
MRPL40P36534 YDL157CYDL157C 357 nt2.02□□□□□ -2.09
MRPL40P36534 LOC1YFR001W 615 nt2.02□□□□□ -2.09
MRPL40P36534 YPS5YGL259W 498 nt2.02□□□□□ -2.09
MRPL40P36534 YOR169CYOR169C 465 nt2.02□□□□□ -2.09
MRPL40P36534 TOA1YOR194C 861 nt2.02□□□□□ -2.09
MRPL40P36534 DIS3YOL021C 3006 nt2.01□□□□□ -2.09
MRPL40P36534 CDC60YPL160W 3273 nt2.01□□□□□ -2.09
MRPL40P36534 YKR075W-AYKR075W-A 270 nt2.01□□□□□ -2.09
MRPL40P36534 DGR1YNL130C-A 147 nt2.01□□□□□ -2.09
MRPL40P36534 YOR333CYOR333C 417 nt2.01□□□□□ -2.09
MRPL40P36534 DFG16YOR030W 1860 nt2.01□□□□□ -2.09
MRPL40P36534 CDC53YDL132W 2448 nt2□□□□□ -2.09
MRPL40P36534 SDL1YIL167W 633 nt2□□□□□ -2.09
MRPL40P36534 YET1YKL065C 621 nt2□□□□□ -2.09
MRPL40P36534 CAT2YML042W 2013 nt2□□□□□ -2.09
MRPL40P36534 MNE1YOR350C 1992 nt1.99□□□□□ -2.09
MRPL40P36534 MGA2YIR033W 3342 nt1.99□□□□□ -2.09
MRPL40P36534 SSF2YDR312W 1362 nt1.99□□□□□ -2.09
MRPL40P36534 CFT2YLR115W 2580 nt1.99□□□□□ -2.09
MRPL40P36534 AHC2YCR082W 387 nt1.99□□□□□ -2.09
MRPL40P36534 CDC50YCR094W 1176 nt1.99□□□□□ -2.09
MRPL40P36534 YDR199WYDR199W 366 nt1.99□□□□□ -2.09
MRPL40P36534 PIB1YDR313C 861 nt1.99□□□□□ -2.09
MRPL40P36534 IRC4YDR540C 540 nt1.99□□□□□ -2.09
MRPL40P36534 YGL230CYGL230C 444 nt1.99□□□□□ -2.09
MRPL40P36534 SPC2YML055W 537 nt1.99□□□□□ -2.09
MRPL40P36534 ADF1YCL058W-A 342 nt1.99□□□□□ -2.09
MRPL40P36534 HER1YOR227W 3741 nt1.99□□□□□ -2.09
MRPL40P36534 DAD1YDR016C 285 nt1.98□□□□□ -2.09
MRPL40P36534 TSA2YDR453C 591 nt1.98□□□□□ -2.09
MRPL40P36534 YHR210CYHR210C 1026 nt1.98□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms