Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.14■□□□□ 0.65
CHMP24386 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP24386 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP24386 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP24386 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP24386 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CHMP24386 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP24386 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP24386 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP24386 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP24386 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP24386 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP24386 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP24386 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP24386 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP24386 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CHMP24386 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP24386 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP24386 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP24386 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP24386 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CHMP24386 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP24386 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP24386 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP24386 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP24386 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP24386 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.12■□□□□ 0.65
CHMP24386 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.12■□□□□ 0.65
CHMP24386 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.12■□□□□ 0.65
CHMP24386 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP24386 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP24386 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP24386 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CHMP24386 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP24386 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP24386 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP24386 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHMP24386 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP24386 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHMP24386 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.11■□□□□ 0.65
CHMP24386 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP24386 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP24386 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP24386 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP24386 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP24386 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP24386 AC007952.6-201ENST00000573168 2673 ntBASIC19.1■□□□□ 0.65
CHMP24386 AC003957.1-201ENST00000625108 2673 ntBASIC19.1■□□□□ 0.65
CHMP24386 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP24386 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP24386 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP24386 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHMP24386 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP24386 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP24386 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP24386 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP24386 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHMP24386 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.1■□□□□ 0.65
CHMP24386 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CHMP24386 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP24386 AL391422.3-201ENST00000603791 2761 ntBASIC19.1■□□□□ 0.65
CHMP24386 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP24386 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHMP24386 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.1■□□□□ 0.65
CHMP24386 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP24386 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHMP24386 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP24386 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms