Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NCK1P16333 AC005224.4-201ENST00000583262 1652 ntBASIC19.36■□□□□ 0.69
NCK1P16333 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NCK1P16333 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.36■□□□□ 0.69
NCK1P16333 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.36■□□□□ 0.69
NCK1P16333 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCK1P16333 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCK1P16333 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCK1P16333 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NCK1P16333 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCK1P16333 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCK1P16333 BX842568.3-201ENST00000418104 571 ntBASIC19.35■□□□□ 0.69
NCK1P16333 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NCK1P16333 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NCK1P16333 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.35■□□□□ 0.69
NCK1P16333 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCK1P16333 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NCK1P16333 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NCK1P16333 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NCK1P16333 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NCK1P16333 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.34■□□□□ 0.69
NCK1P16333 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NCK1P16333 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 AC116562.4-201ENST00000641316 2276 ntBASIC19.34■□□□□ 0.69
NCK1P16333 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.34■□□□□ 0.69
NCK1P16333 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.34■□□□□ 0.69
NCK1P16333 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NCK1P16333 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.33■□□□□ 0.69
NCK1P16333 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NCK1P16333 AC092720.2-201ENST00000602388 1665 ntBASIC19.33■□□□□ 0.69
NCK1P16333 SMG8-203ENST00000578922 2178 ntBASIC19.33■□□□□ 0.69
NCK1P16333 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NCK1P16333 AL020996.1-203ENST00000536896 2307 ntBASIC19.33■□□□□ 0.69
NCK1P16333 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NCK1P16333 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.33■□□□□ 0.68
NCK1P16333 AL356441.2-201ENST00000443009 864 ntBASIC19.33■□□□□ 0.68
NCK1P16333 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NCK1P16333 AC126544.1-201ENST00000580842 1059 ntBASIC19.33■□□□□ 0.68
NCK1P16333 MIR4767-201ENST00000582827 78 ntBASIC19.33■□□□□ 0.68
NCK1P16333 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.33■□□□□ 0.68
NCK1P16333 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.33■□□□□ 0.68
NCK1P16333 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.33■□□□□ 0.68
NCK1P16333 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.33■□□□□ 0.68
NCK1P16333 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.33■□□□□ 0.68
NCK1P16333 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.33■□□□□ 0.68
NCK1P16333 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCK1P16333 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
NCK1P16333 AC061975.6-201ENST00000579045 1553 ntBASIC19.32■□□□□ 0.68
NCK1P16333 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCK1P16333 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.32■□□□□ 0.68
NCK1P16333 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.32■□□□□ 0.68
NCK1P16333 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCK1P16333 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NCK1P16333 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCK1P16333 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.32■□□□□ 0.68
NCK1P16333 AC131281.2-201ENST00000520478 145 ntBASIC19.32■□□□□ 0.68
NCK1P16333 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCK1P16333 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.32■□□□□ 0.68
NCK1P16333 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.32■□□□□ 0.68
NCK1P16333 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCK1P16333 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.32■□□□□ 0.68
NCK1P16333 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.32■□□□□ 0.68
NCK1P16333 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NCK1P16333 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.32■□□□□ 0.68
NCK1P16333 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCK1P16333 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.32■□□□□ 0.68
NCK1P16333 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCK1P16333 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.32■□□□□ 0.68
NCK1P16333 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NCK1P16333 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NCK1P16333 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.31■□□□□ 0.68
NCK1P16333 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.31■□□□□ 0.68
NCK1P16333 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCK1P16333 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NCK1P16333 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms