Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPP40O75818 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPP40O75818 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RPP40O75818 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPP40O75818 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RPP40O75818 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPP40O75818 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPP40O75818 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.09■□□□□ 0.97
RPP40O75818 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 UBE2SP1-201ENST00000450587 669 ntBASIC21.09■□□□□ 0.97
RPP40O75818 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.09■□□□□ 0.97
RPP40O75818 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.09■□□□□ 0.97
RPP40O75818 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.09■□□□□ 0.97
RPP40O75818 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
RPP40O75818 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPP40O75818 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RPP40O75818 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.09■□□□□ 0.97
RPP40O75818 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.08■□□□□ 0.97
RPP40O75818 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPP40O75818 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.08■□□□□ 0.97
RPP40O75818 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPP40O75818 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.08■□□□□ 0.97
RPP40O75818 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.08■□□□□ 0.97
RPP40O75818 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPP40O75818 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
RPP40O75818 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPP40O75818 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPP40O75818 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.08■□□□□ 0.96
RPP40O75818 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPP40O75818 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.08■□□□□ 0.96
RPP40O75818 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPP40O75818 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP40O75818 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.07■□□□□ 0.96
RPP40O75818 AL024507.2-201ENST00000606070 2574 ntBASIC21.07■□□□□ 0.96
RPP40O75818 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP40O75818 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.07■□□□□ 0.96
RPP40O75818 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RPP40O75818 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP40O75818 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.07■□□□□ 0.96
RPP40O75818 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.07■□□□□ 0.96
RPP40O75818 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.07■□□□□ 0.96
RPP40O75818 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.07■□□□□ 0.96
RPP40O75818 AC243732.1-201ENST00000612648 864 ntBASIC21.07■□□□□ 0.96
RPP40O75818 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPP40O75818 AC005229.4-201ENST00000610085 2198 ntBASIC21.07■□□□□ 0.96
RPP40O75818 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
RPP40O75818 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.07■□□□□ 0.96
RPP40O75818 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPP40O75818 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP40O75818 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.07■□□□□ 0.96
RPP40O75818 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPP40O75818 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.06■□□□□ 0.96
RPP40O75818 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPP40O75818 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.06■□□□□ 0.96
RPP40O75818 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.06■□□□□ 0.96
RPP40O75818 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.06■□□□□ 0.96
RPP40O75818 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.06■□□□□ 0.96
RPP40O75818 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
RPP40O75818 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RPP40O75818 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.06■□□□□ 0.96
RPP40O75818 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPP40O75818 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.06■□□□□ 0.96
RPP40O75818 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
RPP40O75818 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.05■□□□□ 0.96
RPP40O75818 AF106564.1-201ENST00000607058 2553 ntBASIC21.05■□□□□ 0.96
RPP40O75818 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP40O75818 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP40O75818 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.05■□□□□ 0.96
RPP40O75818 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP40O75818 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP40O75818 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPP40O75818 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RPP40O75818 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP40O75818 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.05■□□□□ 0.96
RPP40O75818 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP40O75818 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPP40O75818 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPP40O75818 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.04■□□□□ 0.96
RPP40O75818 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.04■□□□□ 0.96
RPP40O75818 MIR718-201ENST00000390190 70 ntBASIC21.04■□□□□ 0.96
RPP40O75818 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPP40O75818 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.04■□□□□ 0.96
RPP40O75818 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.04■□□□□ 0.96
RPP40O75818 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms