Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCN2BO60939 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN2BO60939 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.45■□□□□ 0.7
SCN2BO60939 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN2BO60939 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN2BO60939 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN2BO60939 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN2BO60939 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCN2BO60939 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN2BO60939 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN2BO60939 LINC02228-203ENST00000641970 1355 ntBASIC19.44■□□□□ 0.7
SCN2BO60939 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN2BO60939 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SCN2BO60939 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN2BO60939 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 MIR638-201ENST00000385237 100 ntBASIC19.44■□□□□ 0.7
SCN2BO60939 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCN2BO60939 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCN2BO60939 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCN2BO60939 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN2BO60939 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN2BO60939 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN2BO60939 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN2BO60939 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN2BO60939 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.43■□□□□ 0.7
SCN2BO60939 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.43■□□□□ 0.7
SCN2BO60939 SLC7A5P2-201ENST00000553010 536 ntBASIC19.43■□□□□ 0.7
SCN2BO60939 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN2BO60939 TERF1P2-201ENST00000583350 1212 ntBASIC19.43■□□□□ 0.7
SCN2BO60939 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SCN2BO60939 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN2BO60939 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN2BO60939 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SCN2BO60939 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SCN2BO60939 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN2BO60939 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SCN2BO60939 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN2BO60939 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SCN2BO60939 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SCN2BO60939 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
SCN2BO60939 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.42■□□□□ 0.7
SCN2BO60939 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 AC123595.1-201ENST00000440769 1046 ntBASIC19.42■□□□□ 0.7
SCN2BO60939 AC104187.1-201ENST00000607510 612 ntBASIC19.42■□□□□ 0.7
SCN2BO60939 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN2BO60939 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN2BO60939 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN2BO60939 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN2BO60939 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN2BO60939 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN2BO60939 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN2BO60939 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN2BO60939 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN2BO60939 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN2BO60939 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN2BO60939 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN2BO60939 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN2BO60939 AC245052.3-201ENST00000450182 901 ntBASIC19.41■□□□□ 0.7
SCN2BO60939 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN2BO60939 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN2BO60939 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN2BO60939 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SCN2BO60939 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN2BO60939 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN2BO60939 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SCN2BO60939 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN2BO60939 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.4■□□□□ 0.7
SCN2BO60939 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN2BO60939 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SCN2BO60939 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN2BO60939 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms