Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HCN1O60741 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HCN1O60741 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.12■□□□□ 0.65
HCN1O60741 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HCN1O60741 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.12■□□□□ 0.65
HCN1O60741 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HCN1O60741 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.12■□□□□ 0.65
HCN1O60741 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.12■□□□□ 0.65
HCN1O60741 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.12■□□□□ 0.65
HCN1O60741 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HCN1O60741 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HCN1O60741 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.12■□□□□ 0.65
HCN1O60741 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
HCN1O60741 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HCN1O60741 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HCN1O60741 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.12■□□□□ 0.65
HCN1O60741 AC010536.3-201ENST00000620306 533 ntBASIC19.12■□□□□ 0.65
HCN1O60741 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HCN1O60741 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HCN1O60741 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HCN1O60741 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.11■□□□□ 0.65
HCN1O60741 POU5F1P4-201ENST00000413175 1085 ntBASIC19.11■□□□□ 0.65
HCN1O60741 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.11■□□□□ 0.65
HCN1O60741 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.11■□□□□ 0.65
HCN1O60741 RNF165-205ENST00000588679 2904 ntBASIC19.11■□□□□ 0.65
HCN1O60741 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.11■□□□□ 0.65
HCN1O60741 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.11■□□□□ 0.65
HCN1O60741 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HCN1O60741 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.1■□□□□ 0.65
HCN1O60741 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 GPX1P1-201ENST00000388829 606 ntBASIC19.1■□□□□ 0.65
HCN1O60741 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.1■□□□□ 0.65
HCN1O60741 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.1■□□□□ 0.65
HCN1O60741 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.1■□□□□ 0.65
HCN1O60741 AC005181.1-201ENST00000604782 1256 ntBASIC19.1■□□□□ 0.65
HCN1O60741 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HCN1O60741 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HCN1O60741 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.1■□□□□ 0.65
HCN1O60741 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.09■□□□□ 0.65
HCN1O60741 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HCN1O60741 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HCN1O60741 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
HCN1O60741 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.09■□□□□ 0.65
HCN1O60741 AC104771.1-201ENST00000603335 964 ntBASIC19.09■□□□□ 0.65
HCN1O60741 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.09■□□□□ 0.65
HCN1O60741 AL109923.1-201ENST00000618799 583 ntBASIC19.09■□□□□ 0.65
HCN1O60741 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.09■□□□□ 0.65
HCN1O60741 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HCN1O60741 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HCN1O60741 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
HCN1O60741 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCN1O60741 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HCN1O60741 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HCN1O60741 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.08■□□□□ 0.65
HCN1O60741 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCN1O60741 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCN1O60741 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCN1O60741 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCN1O60741 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HCN1O60741 AL121832.2-201ENST00000610979 668 ntBASIC19.08■□□□□ 0.64
HCN1O60741 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HCN1O60741 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HCN1O60741 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HCN1O60741 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HCN1O60741 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HCN1O60741 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HCN1O60741 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms