Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
AP3D1O14617 AIRN-201ENST00000601203 4374 ntBASIC19.11■□□□□ 0.65
AP3D1O14617 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3D1O14617 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3D1O14617 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP3D1O14617 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.11■□□□□ 0.65
AP3D1O14617 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
AP3D1O14617 KRT18P14-201ENST00000534205 1250 ntBASIC19.11■□□□□ 0.65
AP3D1O14617 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.11■□□□□ 0.65
AP3D1O14617 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
AP3D1O14617 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
AP3D1O14617 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3D1O14617 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3D1O14617 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
AP3D1O14617 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
AP3D1O14617 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3D1O14617 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AP3D1O14617 AP004607.4-201ENST00000530158 1459 ntBASIC19.1■□□□□ 0.65
AP3D1O14617 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3D1O14617 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3D1O14617 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.1■□□□□ 0.65
AP3D1O14617 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
AP3D1O14617 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
AP3D1O14617 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.1■□□□□ 0.65
AP3D1O14617 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP3D1O14617 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
AP3D1O14617 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP3D1O14617 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
AP3D1O14617 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
AP3D1O14617 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
AP3D1O14617 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
AP3D1O14617 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 AC104187.1-201ENST00000607510 612 ntBASIC19.09■□□□□ 0.65
AP3D1O14617 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
AP3D1O14617 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 AC138932.1-201ENST00000534164 6830 ntBASIC19.09■□□□□ 0.65
AP3D1O14617 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.09■□□□□ 0.65
AP3D1O14617 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.09■□□□□ 0.65
AP3D1O14617 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.09■□□□□ 0.65
AP3D1O14617 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3D1O14617 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
AP3D1O14617 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.08■□□□□ 0.65
AP3D1O14617 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.08■□□□□ 0.65
AP3D1O14617 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
AP3D1O14617 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
AP3D1O14617 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3D1O14617 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.08■□□□□ 0.64
AP3D1O14617 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.08■□□□□ 0.64
AP3D1O14617 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.08■□□□□ 0.64
AP3D1O14617 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.08■□□□□ 0.64
AP3D1O14617 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.08■□□□□ 0.64
AP3D1O14617 AC008175.2-201ENST00000612840 297 ntBASIC19.08■□□□□ 0.64
AP3D1O14617 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
AP3D1O14617 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3D1O14617 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
AP3D1O14617 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
AP3D1O14617 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
AP3D1O14617 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.07■□□□□ 0.64
AP3D1O14617 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.07■□□□□ 0.64
AP3D1O14617 AC138907.5-202ENST00000569484 235 ntBASIC19.07■□□□□ 0.64
AP3D1O14617 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.07■□□□□ 0.64
AP3D1O14617 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.07■□□□□ 0.64
AP3D1O14617 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
AP3D1O14617 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms