Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN4O14493 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.33■□□□□ 0.68
CLDN4O14493 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.33■□□□□ 0.68
CLDN4O14493 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN4O14493 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN4O14493 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN4O14493 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.33■□□□□ 0.68
CLDN4O14493 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN4O14493 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLDN4O14493 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLDN4O14493 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN4O14493 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CLDN4O14493 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN4O14493 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN4O14493 PGM5P4-201ENST00000421970 445 ntBASIC19.32■□□□□ 0.68
CLDN4O14493 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN4O14493 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.32■□□□□ 0.68
CLDN4O14493 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.32■□□□□ 0.68
CLDN4O14493 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN4O14493 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLDN4O14493 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.32■□□□□ 0.68
CLDN4O14493 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CLDN4O14493 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN4O14493 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN4O14493 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN4O14493 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN4O14493 MCRIP2P1-201ENST00000394346 511 ntBASIC19.31■□□□□ 0.68
CLDN4O14493 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CLDN4O14493 SLC29A4P1-201ENST00000398760 971 ntBASIC19.31■□□□□ 0.68
CLDN4O14493 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.31■□□□□ 0.68
CLDN4O14493 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.31■□□□□ 0.68
CLDN4O14493 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.31■□□□□ 0.68
CLDN4O14493 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLDN4O14493 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN4O14493 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN4O14493 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN4O14493 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLDN4O14493 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CLDN4O14493 MKRN4P-201ENST00000444706 1521 ntBASIC19.3■□□□□ 0.68
CLDN4O14493 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CLDN4O14493 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN4O14493 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN4O14493 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.3■□□□□ 0.68
CLDN4O14493 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN4O14493 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.3■□□□□ 0.68
CLDN4O14493 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.3■□□□□ 0.68
CLDN4O14493 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN4O14493 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDN4O14493 AC010980.2-201ENST00000587099 1412 ntBASIC19.3■□□□□ 0.68
CLDN4O14493 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CLDN4O14493 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.3■□□□□ 0.68
CLDN4O14493 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDN4O14493 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CLDN4O14493 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN4O14493 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN4O14493 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN4O14493 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN4O14493 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN4O14493 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN4O14493 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.29■□□□□ 0.68
CLDN4O14493 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CLDN4O14493 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN4O14493 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN4O14493 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN4O14493 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN4O14493 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLDN4O14493 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CLDN4O14493 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN4O14493 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN4O14493 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLDN4O14493 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CLDN4O14493 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN4O14493 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN4O14493 PLK5-205ENST00000642079 1969 ntBASIC19.28■□□□□ 0.68
CLDN4O14493 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN4O14493 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN4O14493 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN4O14493 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN4O14493 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms