Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TMEM88BA6NKF7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 LIN28AP1-201ENST00000429574 405 ntBASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 KRT18P48-201ENST00000434763 852 ntBASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TMEM88BA6NKF7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TMEM88BA6NKF7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 C11orf96-202ENST00000528572 1834 ntBASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TMEM88BA6NKF7 NBPF21P-201ENST00000425093 1451 ntBASIC24.14■■□□□ 1.46
TMEM88BA6NKF7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.14■■□□□ 1.46
TMEM88BA6NKF7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 ATP5G1P1-201ENST00000448724 379 ntBASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 AL121829.2-201ENST00000620908 328 ntBASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
TMEM88BA6NKF7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 CRYGFP-201ENST00000418459 633 ntBASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TMEM88BA6NKF7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 LINC01238-205ENST00000567549 1107 ntBASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
TMEM88BA6NKF7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms