Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LINC01546A6NGU7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LINC01546A6NGU7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LINC01546A6NGU7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LINC01546A6NGU7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 ATP5G2P3-201ENST00000429083 425 ntBASIC14.5□□□□□ -0.09
LINC01546A6NGU7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC01546A6NGU7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.49□□□□□ -0.09
LINC01546A6NGU7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC01546A6NGU7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01546A6NGU7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms