Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
TRIM49BA6NDI0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM49BA6NDI0 AC116050.2-201ENST00000612102 1779 ntBASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 KRT18P20-201ENST00000548986 1279 ntBASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 AL162377.1-201ENST00000618844 1793 ntBASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM49BA6NDI0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 AC091799.1-201ENST00000422823 811 ntBASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 RBM17P2-201ENST00000616397 1405 ntBASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.62■■□□□ 1.21
TRIM49BA6NDI0 AC019069.1-201ENST00000610008 1333 ntBASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 UBE2DNL-204ENST00000602536 740 ntBASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRIM49BA6NDI0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
TRIM49BA6NDI0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 AFG3L1P-217ENST00000557444 2447 ntBASIC22.59■■□□□ 1.21
TRIM49BA6NDI0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM49BA6NDI0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.58■■□□□ 1.2
TRIM49BA6NDI0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms