Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 AP004607.4-201ENST00000530158 1459 ntBASIC20.47■□□□□ 0.87
CCDC189A1A4V9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC189A1A4V9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 FEM1AP1-201ENST00000431297 1995 ntBASIC20.46■□□□□ 0.87
CCDC189A1A4V9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC189A1A4V9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CCDC189A1A4V9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CCDC189A1A4V9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 AC121338.2-201ENST00000622535 1744 ntBASIC20.44■□□□□ 0.86
CCDC189A1A4V9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.44■□□□□ 0.86
CCDC189A1A4V9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC189A1A4V9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 AC142381.2-201ENST00000566120 298 ntBASIC20.43■□□□□ 0.86
CCDC189A1A4V9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 AC008175.2-201ENST00000612840 297 ntBASIC20.43■□□□□ 0.86
CCDC189A1A4V9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC189A1A4V9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms