Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-1A0A0K0K1D8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-1A0A0K0K1D8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-1A0A0K0K1D8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC087289.5-201ENST00000586076 3175 ntBASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 IGHV3-19-201ENST00000521488 291 ntBASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC061975.6-201ENST00000579045 1553 ntBASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-1A0A0K0K1D8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC098818.2-201ENST00000564925 2320 ntBASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 POU5F1P4-201ENST00000413175 1085 ntBASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TNXA-203ENST00000507684 2038 ntBASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV6-1A0A0K0K1D8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV6-1A0A0K0K1D8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms