Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 GUSBP5-201ENST00000418136 578 ntBASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 AC053503.5-201ENST00000601508 636 ntBASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 AC116562.4-201ENST00000641316 2276 ntBASIC14.48□□□□□ -0.09
TRBV27A0A0K0K1C4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 IGHV3-19-201ENST00000521488 291 ntBASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 EEF1DP3-203ENST00000566025 782 ntBASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV27A0A0K0K1C4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 AL020996.1-203ENST00000536896 2307 ntBASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 MIR4466-201ENST00000606121 54 ntBASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 AC233992.3-201ENST00000607491 485 ntBASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.46□□□□□ -0.09
TRBV27A0A0K0K1C4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV27A0A0K0K1C4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV27A0A0K0K1C4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.46□□□□□ -0.1
TRBV27A0A0K0K1C4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
TRBV27A0A0K0K1C4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRBV27A0A0K0K1C4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRBV27A0A0K0K1C4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms