Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV8-4A0A0B4J246 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 MIR572-201ENST00000384983 95 ntBASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 MIR939-201ENST00000401314 82 ntBASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 AC110285.6-201ENST00000617652 491 ntBASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV8-4A0A0B4J246 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 Z98882.1-201ENST00000622160 2253 ntBASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV8-4A0A0B4J246 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 AC003102.1-202ENST00000563394 1796 ntBASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 AF213884.3-201ENST00000563833 479 ntBASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 BX005040.4-201ENST00000637145 1518 ntBASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-4A0A0B4J246 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-4A0A0B4J246 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms