Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.29■■□□□ 1
TRAV19A0A0A6YYK7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 SOX15-203ENST00000570788 1093 ntBASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 AL356652.1-201ENST00000615962 565 ntBASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV19A0A0A6YYK7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 AP006294.2-201ENST00000641667 209 ntBASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRAV19A0A0A6YYK7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV19A0A0A6YYK7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 KRT17P3-201ENST00000420566 1262 ntBASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRAV19A0A0A6YYK7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.25■□□□□ 0.99
TRAV19A0A0A6YYK7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms