Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 AL138724.1-201ENST00000606771 1088 ntBASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV18A0A075B6X5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 AC136469.2-201ENST00000623944 1028 ntBASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 BX005040.4-201ENST00000637145 1518 ntBASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 AC011484.1-201ENST00000377652 1995 ntBASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV18A0A075B6X5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 TCF3P1-201ENST00000423021 1937 ntBASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV18A0A075B6X5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV18A0A075B6X5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 AC116562.4-201ENST00000641316 2276 ntBASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 AC092720.2-201ENST00000602388 1665 ntBASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV18A0A075B6X5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms