Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC008013.3-201ENST00000605711 675 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC9.79□□□□□ -0.84
MTHFRP42898 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC9.79□□□□□ -0.84
MTHFRP42898 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
MTHFRP42898 ATAD1-201ENST00000308448 4640 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
MTHFRP42898 FP325330.3-201ENST00000623760 9537 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 SLC10A5-201ENST00000518568 2568 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
MTHFRP42898 AC244636.2-201ENST00000448031 1669 ntBASIC9.79□□□□□ -0.84
MTHFRP42898 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 TRIM23-201ENST00000231524 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 PRUNE1-203ENST00000368935 2238 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 DDX24-202ENST00000544005 2214 ntTSL 2 BASIC9.79□□□□□ -0.84
MTHFRP42898 AC005307.1-201ENST00000567877 1570 ntTSL 3 BASIC9.79□□□□□ -0.84
MTHFRP42898 EPC1-202ENST00000319778 4057 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 TTPAL-202ENST00000372904 6234 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
MTHFRP42898 CYP4A22-201ENST00000294337 1725 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
MTHFRP42898 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
MTHFRP42898 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC9.78□□□□□ -0.84
MTHFRP42898 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC9.78□□□□□ -0.84
MTHFRP42898 TNIP3-203ENST00000507879 1778 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
MTHFRP42898 RBM44-202ENST00000409864 3449 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
MTHFRP42898 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
MTHFRP42898 TRIM39-203ENST00000396547 3187 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
MTHFRP42898 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 ZNF830-201ENST00000361952 2246 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
MTHFRP42898 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 SH2D4A-204ENST00000519207 1984 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 MYEF2-216ENST00000616409 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 RNA5SP78-201ENST00000364622 118 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 AC121338.1-201ENST00000380601 1287 ntTSL 2 BASIC9.78□□□□□ -0.84
MTHFRP42898 SNORD83A-201ENST00000386747 95 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 RPSAP2-201ENST00000416785 888 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 HNRNPA1P70-201ENST00000420836 1087 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 AL139246.1-201ENST00000424657 455 ntTSL 3 BASIC9.78□□□□□ -0.84
MTHFRP42898 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC9.78□□□□□ -0.84
MTHFRP42898 AL162584.1-201ENST00000437097 633 ntTSL 3 BASIC9.78□□□□□ -0.84
MTHFRP42898 AC073465.3-201ENST00000448468 405 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC9.78□□□□□ -0.84
MTHFRP42898 HGNC:18790-205ENST00000504171 980 ntTSL 2 BASIC9.78□□□□□ -0.84
MTHFRP42898 NBPF22P-201ENST00000508988 1143 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 OR4A50P-201ENST00000526321 908 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 HAL-203ENST00000541929 3846 ntTSL 2 BASIC9.78□□□□□ -0.84
MTHFRP42898 AP002383.5-201ENST00000542623 1161 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 PDLIM1P3-201ENST00000582370 599 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 AC036176.2-201ENST00000589763 1153 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 TRAM2-AS1-202ENST00000605910 1053 ntTSL 3 BASIC9.78□□□□□ -0.84
MTHFRP42898 AC090922.1-201ENST00000606244 1018 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC9.78□□□□□ -0.84
MTHFRP42898 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
MTHFRP42898 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 CXorf21-201ENST00000378962 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 TMTC4-202ENST00000342624 3602 ntTSL 2 BASIC9.78□□□□□ -0.84
MTHFRP42898 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
MTHFRP42898 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 AL133492.1-201ENST00000617854 3955 ntBASIC9.78□□□□□ -0.84
MTHFRP42898 TTC1-201ENST00000231238 1467 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 ZSWIM2-201ENST00000295131 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
MTHFRP42898 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC9.78□□□□□ -0.84
MTHFRP42898 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
MTHFRP42898 LINC01531-202ENST00000536898 3312 ntTSL 2 BASIC9.77□□□□□ -0.84
MTHFRP42898 MARCH10-203ENST00000544856 3338 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
MTHFRP42898 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
MTHFRP42898 AP001527.1-201ENST00000566440 1957 ntBASIC9.77□□□□□ -0.84
MTHFRP42898 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
MTHFRP42898 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC9.77□□□□□ -0.84
MTHFRP42898 ANO10-201ENST00000292246 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
MTHFRP42898 SPATA31E1-201ENST00000325643 4478 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 WWP2-216ENST00000569174 2474 ntTSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 PCDHGA5-202ENST00000611914 3552 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
MTHFRP42898 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
MTHFRP42898 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 AL158071.4-201ENST00000608358 4125 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 GBP2-201ENST00000370466 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 DDR1-AS1-206ENST00000458361 3994 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 AC023824.7-201ENST00000623041 5731 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
MTHFRP42898 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
MTHFRP42898 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 LINC00272-201ENST00000367563 740 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
MTHFRP42898 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
MTHFRP42898 MORN2-202ENST00000409077 465 ntTSL 5 BASIC9.77□□□□□ -0.85
MTHFRP42898 RN7SKP112-201ENST00000411213 318 ntBASIC9.77□□□□□ -0.85
MTHFRP42898 RPL4P5-201ENST00000413888 1276 ntBASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms