RNA–Protein interactions for RNA: ENST00000411213.1

RN7SKP112-201, Transcript of RNA, 7SK small nuclear pseudogene 112, humanhuman

BASIC

Gene RN7SKP112, Length 318 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP112-201ENST00000411213 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
RN7SKP112-201ENST00000411213 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
RN7SKP112-201ENST00000411213 SENP3Q9H4L4 574 aaPredicted RBP24.61■■□□□ 1.53
RN7SKP112-201ENST00000411213 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
RN7SKP112-201ENST00000411213 FOXD1Q16676 465 aa22.86■■□□□ 1.25
RN7SKP112-201ENST00000411213 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
RN7SKP112-201ENST00000411213 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.04
RN7SKP112-201ENST00000411213 PIAS4Q8N2W9 510 aaPredicted RBP21.46■■□□□ 1.03
RN7SKP112-201ENST00000411213 MSH5O43196 834 aa21.44■■□□□ 1.02
RN7SKP112-201ENST00000411213 PPP6R1Q9UPN7 881 aa21.42■■□□□ 1.02
RN7SKP112-201ENST00000411213 ADRA2BP18089 450 aa21.39■■□□□ 1.01
RN7SKP112-201ENST00000411213 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
RN7SKP112-201ENST00000411213 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
RN7SKP112-201ENST00000411213 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
RN7SKP112-201ENST00000411213 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
RN7SKP112-201ENST00000411213 PPP4R3CPQ6ZMV5 832 aa19.3■□□□□ 0.68
RN7SKP112-201ENST00000411213 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
RN7SKP112-201ENST00000411213 ABCC9O60706 1549 aa18.96■□□□□ 0.63
RN7SKP112-201ENST00000411213 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
RN7SKP112-201ENST00000411213 HOXD11P31277 338 aaPredicted RBP18.8■□□□□ 0.6
RN7SKP112-201ENST00000411213 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
RN7SKP112-201ENST00000411213 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
RN7SKP112-201ENST00000411213 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
RN7SKP112-201ENST00000411213 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
RN7SKP112-201ENST00000411213 DCAF8L2P0C7V8 631 aa18.32■□□□□ 0.52
RN7SKP112-201ENST00000411213 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
RN7SKP112-201ENST00000411213 RNF39Q9H2S5 420 aa18.25■□□□□ 0.51
RN7SKP112-201ENST00000411213 RB1CC1Q8TDY2 1594 aa18.18■□□□□ 0.5
RN7SKP112-201ENST00000411213 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
RN7SKP112-201ENST00000411213 NACADO15069 1562 aa18.13■□□□□ 0.49
RN7SKP112-201ENST00000411213 C1QBPQ07021 282 aaKnown RBP18.03■□□□□ 0.48
RN7SKP112-201ENST00000411213 KCNA4P22459 653 aa18.02■□□□□ 0.48
RN7SKP112-201ENST00000411213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18■□□□□ 0.47
RN7SKP112-201ENST00000411213 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
RN7SKP112-201ENST00000411213 ZCCHC6Q5VYS8 1495 aaKnown RBP17.91■□□□□ 0.46
RN7SKP112-201ENST00000411213 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
RN7SKP112-201ENST00000411213 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
RN7SKP112-201ENST00000411213 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
RN7SKP112-201ENST00000411213 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
RN7SKP112-201ENST00000411213 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
RN7SKP112-201ENST00000411213 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
RN7SKP112-201ENST00000411213 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
RN7SKP112-201ENST00000411213 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
RN7SKP112-201ENST00000411213 CAPN15O75808 1086 aa17.32■□□□□ 0.36
RN7SKP112-201ENST00000411213 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
RN7SKP112-201ENST00000411213 APLP2Q06481 763 aa17.21■□□□□ 0.35
RN7SKP112-201ENST00000411213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
RN7SKP112-201ENST00000411213 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
RN7SKP112-201ENST00000411213 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
RN7SKP112-201ENST00000411213 DSG3P32926 999 aa17.12■□□□□ 0.33
RN7SKP112-201ENST00000411213 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
RN7SKP112-201ENST00000411213 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
RN7SKP112-201ENST00000411213 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
RN7SKP112-201ENST00000411213 CECR2Q9BXF3 1484 aa17.06■□□□□ 0.32
RN7SKP112-201ENST00000411213 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
RN7SKP112-201ENST00000411213 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
RN7SKP112-201ENST00000411213 MYCNP04198 464 aaPredicted RBP16.97■□□□□ 0.31
RN7SKP112-201ENST00000411213 ABCB7O75027 752 aa16.89■□□□□ 0.29
RN7SKP112-201ENST00000411213 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
RN7SKP112-201ENST00000411213 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
RN7SKP112-201ENST00000411213 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
RN7SKP112-201ENST00000411213 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
RN7SKP112-201ENST00000411213 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
RN7SKP112-201ENST00000411213 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
RN7SKP112-201ENST00000411213 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
RN7SKP112-201ENST00000411213 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
RN7SKP112-201ENST00000411213 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
RN7SKP112-201ENST00000411213 POLA2Q14181 598 aa16.59■□□□□ 0.25
RN7SKP112-201ENST00000411213 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
RN7SKP112-201ENST00000411213 ZBTB22O15209 634 aa16.53■□□□□ 0.24
RN7SKP112-201ENST00000411213 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
RN7SKP112-201ENST00000411213 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
RN7SKP112-201ENST00000411213 WIZO95785 1651 aa16.42■□□□□ 0.22
RN7SKP112-201ENST00000411213 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
RN7SKP112-201ENST00000411213 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
RN7SKP112-201ENST00000411213 NESP48681 1621 aa16.33■□□□□ 0.2
RN7SKP112-201ENST00000411213 ATXN8OSP0DMR3 200 aa16.32■□□□□ 0.2
RN7SKP112-201ENST00000411213 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
RN7SKP112-201ENST00000411213 LAMC3Q9Y6N6 1575 aa16.3■□□□□ 0.2
RN7SKP112-201ENST00000411213 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
RN7SKP112-201ENST00000411213 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
RN7SKP112-201ENST00000411213 POTEHQ6S545 545 aa16.27■□□□□ 0.2
RN7SKP112-201ENST00000411213 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
RN7SKP112-201ENST00000411213 CUX2O14529 1486 aa16.22■□□□□ 0.19
RN7SKP112-201ENST00000411213 CFTRP13569 1480 aa16.11■□□□□ 0.17
RN7SKP112-201ENST00000411213 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
RN7SKP112-201ENST00000411213 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
RN7SKP112-201ENST00000411213 SUPT5HO00267 1087 aaKnown RBP16.08■□□□□ 0.16
RN7SKP112-201ENST00000411213 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
RN7SKP112-201ENST00000411213 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
RN7SKP112-201ENST00000411213 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
RN7SKP112-201ENST00000411213 THOC2Q8NI27 1593 aaKnown RBP16.04■□□□□ 0.16
RN7SKP112-201ENST00000411213 MRC2Q9UBG0 1479 aa16.04■□□□□ 0.16
RN7SKP112-201ENST00000411213 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
RN7SKP112-201ENST00000411213 FBLN2P98095 1184 aa15.97■□□□□ 0.15
RN7SKP112-201ENST00000411213 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
RN7SKP112-201ENST00000411213 WDR62O43379 1518 aa15.94■□□□□ 0.14
RN7SKP112-201ENST00000411213 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
RN7SKP112-201ENST00000411213 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
RN7SKP112-201ENST00000411213 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms