RNA–Protein interactions for RNA: ENST00000507879.5

TNIP3-203, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP3, Length 1,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-203ENST00000507879 NISCHQ9Y2I1 1504 aa18.02■□□□□ 0.47
TNIP3-203ENST00000507879 PELP1Q8IZL8 1130 aaKnown RBP17.11■□□□□ 0.33
TNIP3-203ENST00000507879 HRCP23327 699 aa16.89■□□□□ 0.29
TNIP3-203ENST00000507879 MYT1Q01538 1121 aa16.69■□□□□ 0.26
TNIP3-203ENST00000507879 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
TNIP3-203ENST00000507879 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
TNIP3-203ENST00000507879 PPARGC1BQ86YN6 1023 aaKnown RBP16.1■□□□□ 0.17
TNIP3-203ENST00000507879 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
TNIP3-203ENST00000507879 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
TNIP3-203ENST00000507879 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
TNIP3-203ENST00000507879 PCGF6Q9BYE7 350 aa16.05■□□□□ 0.16
TNIP3-203ENST00000507879 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
TNIP3-203ENST00000507879 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
TNIP3-203ENST00000507879 ABCC9O60706 1549 aa15.96■□□□□ 0.14
TNIP3-203ENST00000507879 DNAJC5BQ9UF47 199 aa15.89■□□□□ 0.13
TNIP3-203ENST00000507879 TTBK1Q5TCY1 1321 aaPredicted RBP15.87■□□□□ 0.13
TNIP3-203ENST00000507879 TRIM26Q12899 539 aaPredicted RBP15.77■□□□□ 0.12
TNIP3-203ENST00000507879 SUPT5HO00267 1087 aaKnown RBP15.64■□□□□ 0.1
TNIP3-203ENST00000507879 ACIN1Q9UKV3 1341 aaKnown RBP15.64■□□□□ 0.09
TNIP3-203ENST00000507879 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
TNIP3-203ENST00000507879 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.07
TNIP3-203ENST00000507879 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
TNIP3-203ENST00000507879 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
TNIP3-203ENST00000507879 NEUROD1Q13562 356 aa15.41■□□□□ 0.06
TNIP3-203ENST00000507879 GTF3C3Q9Y5Q9 886 aa15.36■□□□□ 0.05
TNIP3-203ENST00000507879 LOC105371045A0A1W2PR82 267 aa15.22■□□□□ 0.03
TNIP3-203ENST00000507879 CLSPNQ9HAW4 1339 aa15.1■□□□□ 0.01
TNIP3-203ENST00000507879 DIEXFQ68CQ4 756 aaKnown RBP15.09■□□□□ 0.01
TNIP3-203ENST00000507879 BCL11AQ9H165 835 aa15.06■□□□□ 0
TNIP3-203ENST00000507879 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
TNIP3-203ENST00000507879 ANP32EQ9BTT0 268 aa14.97□□□□□ -0.01
TNIP3-203ENST00000507879 FAM9AQ8IZU1 332 aaPredicted RBP14.87□□□□□ -0.03
TNIP3-203ENST00000507879 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.03
TNIP3-203ENST00000507879 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
TNIP3-203ENST00000507879 RB1CC1Q8TDY2 1594 aa14.75□□□□□ -0.05
TNIP3-203ENST00000507879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
TNIP3-203ENST00000507879 PRKCSHP14314 528 aaPredicted RBP14.72□□□□□ -0.05
TNIP3-203ENST00000507879 ERICH6Q7L0X2 663 aa14.72□□□□□ -0.05
TNIP3-203ENST00000507879 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.05
TNIP3-203ENST00000507879 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
TNIP3-203ENST00000507879 SUPT16HQ9Y5B9 1047 aaKnown RBP14.65□□□□□ -0.06
TNIP3-203ENST00000507879 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
TNIP3-203ENST00000507879 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
TNIP3-203ENST00000507879 MIER1Q8N108 512 aa14.6□□□□□ -0.07
TNIP3-203ENST00000507879 YTHDC1Q96MU7 727 aaKnown RBP14.55□□□□□ -0.08
TNIP3-203ENST00000507879 APLP2Q06481 763 aa14.53□□□□□ -0.08
TNIP3-203ENST00000507879 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
TNIP3-203ENST00000507879 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
TNIP3-203ENST00000507879 MYT1LQ9UL68 1186 aa14.49□□□□□ -0.09
TNIP3-203ENST00000507879 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
TNIP3-203ENST00000507879 NACADO15069 1562 aa14.39□□□□□ -0.11
TNIP3-203ENST00000507879 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
TNIP3-203ENST00000507879 BICRAQ9NZM4 1560 aa14.35□□□□□ -0.11
TNIP3-203ENST00000507879 EIF4G1Q04637 1599 aaKnown RBP14.33□□□□□ -0.11
TNIP3-203ENST00000507879 TNIKQ9UKE5 1360 aa14.3□□□□□ -0.12
TNIP3-203ENST00000507879 CEP162Q5TB80 1403 aa14.29□□□□□ -0.12
TNIP3-203ENST00000507879 FANCIQ9NVI1 1328 aa14.29□□□□□ -0.12
TNIP3-203ENST00000507879 RBM19Q9Y4C8 960 aaKnown RBP14.29□□□□□ -0.12
TNIP3-203ENST00000507879 CUX2O14529 1486 aa14.25□□□□□ -0.13
TNIP3-203ENST00000507879 EEA1Q15075 1411 aa14.24□□□□□ -0.13
TNIP3-203ENST00000507879 ERICH6BQ5W0A0 696 aa14.23□□□□□ -0.13
TNIP3-203ENST00000507879 MSH5O43196 834 aa14.15□□□□□ -0.14
TNIP3-203ENST00000507879 DCAF8L2P0C7V8 631 aa14.14□□□□□ -0.15
TNIP3-203ENST00000507879 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
TNIP3-203ENST00000507879 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
TNIP3-203ENST00000507879 NEFLP07196 543 aa14.07□□□□□ -0.16
TNIP3-203ENST00000507879 FKBP8Q14318 412 aa14.06□□□□□ -0.16
TNIP3-203ENST00000507879 GOLGA3Q08378 1498 aa14.06□□□□□ -0.16
TNIP3-203ENST00000507879 DHX57Q6P158 1386 aaKnown RBP14.05□□□□□ -0.16
TNIP3-203ENST00000507879 DEKP35659 375 aaKnown RBP14.03□□□□□ -0.16
TNIP3-203ENST00000507879 EHMT2Q96KQ7 1210 aa14.01□□□□□ -0.17
TNIP3-203ENST00000507879 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
TNIP3-203ENST00000507879 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
TNIP3-203ENST00000507879 KIF21BO75037 1637 aa14□□□□□ -0.17
TNIP3-203ENST00000507879 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
TNIP3-203ENST00000507879 VPS8Q8N3P4 1428 aa13.97□□□□□ -0.17
TNIP3-203ENST00000507879 CCER2I3L3R5 266 aa13.96□□□□□ -0.17
TNIP3-203ENST00000507879 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.18
TNIP3-203ENST00000507879 BCANQ96GW7 911 aa13.95□□□□□ -0.18
TNIP3-203ENST00000507879 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
TNIP3-203ENST00000507879 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
TNIP3-203ENST00000507879 ABCC8Q09428 1581 aa13.94□□□□□ -0.18
TNIP3-203ENST00000507879 WIZO95785 1651 aa13.94□□□□□ -0.18
TNIP3-203ENST00000507879 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
TNIP3-203ENST00000507879 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
TNIP3-203ENST00000507879 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
TNIP3-203ENST00000507879 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
TNIP3-203ENST00000507879 CLIP1P30622 1438 aa13.88□□□□□ -0.19
TNIP3-203ENST00000507879 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
TNIP3-203ENST00000507879 SOGA1O94964 1423 aa13.86□□□□□ -0.19
TNIP3-203ENST00000507879 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
TNIP3-203ENST00000507879 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
TNIP3-203ENST00000507879 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
TNIP3-203ENST00000507879 KCNH8Q96L42 1107 aa13.81□□□□□ -0.2
TNIP3-203ENST00000507879 NOP58Q9Y2X3 529 aaKnown RBP13.8□□□□□ -0.2
TNIP3-203ENST00000507879 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
TNIP3-203ENST00000507879 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
TNIP3-203ENST00000507879 ITGAEP38570 1179 aa13.77□□□□□ -0.21
TNIP3-203ENST00000507879 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
TNIP3-203ENST00000507879 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms