Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB1Q9Y5G3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 AL356740.2-201ENST00000601559 647 ntBASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGB1Q9Y5G3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 TNXA-203ENST00000507684 2038 ntBASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB1Q9Y5G3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 TCF3P1-201ENST00000423021 1937 ntBASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
PCDHGB1Q9Y5G3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 MIR3621-201ENST00000580529 85 ntBASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 AC092666.2-201ENST00000613287 246 ntBASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB1Q9Y5G3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHGB1Q9Y5G3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB1Q9Y5G3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB1Q9Y5G3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 AP000974.1-201ENST00000623909 2387 ntBASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 SRD5A1P1-201ENST00000442297 786 ntBASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 AP005435.1-201ENST00000529293 1178 ntBASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB1Q9Y5G3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms