Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 CYP2T1P-201ENST00000432607 1285 ntBASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 OR10C1-204ENST00000622521 1039 ntBASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB11Q9Y5F2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 AC068338.2-201ENST00000563278 1430 ntBASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 MIPEPP3-201ENST00000412105 444 ntBASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB11Q9Y5F2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 AC093827.2-201ENST00000512654 315 ntBASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 AC243732.1-201ENST00000612648 864 ntBASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB11Q9Y5F2 RBM17P2-201ENST00000616397 1405 ntBASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 ITM2C-210ENST00000620962 501 ntBASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB11Q9Y5F2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 AC098934.4-201ENST00000564127 592 ntBASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDHB11Q9Y5F2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDHB11Q9Y5F2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms