Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHB9Q9Y5E1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB9Q9Y5E1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 RPS2P52-201ENST00000469610 820 ntBASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB9Q9Y5E1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 AL137060.1-201ENST00000618151 2648 ntBASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 DUSP5P2-201ENST00000426873 1033 ntBASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 AC069236.1-201ENST00000604339 616 ntBASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 OR10C1-204ENST00000622521 1039 ntBASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB9Q9Y5E1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 AC116050.2-201ENST00000612102 1779 ntBASIC20.85■□□□□ 0.93
PCDHB9Q9Y5E1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 CDV3P1-201ENST00000471403 739 ntBASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB9Q9Y5E1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB9Q9Y5E1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms