Protein–RNA interactions for Protein: Q9Y385

UBE2J1, Ubiquitin-conjugating enzyme E2 J1, humanhuman

Predicted RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2J1Q9Y385 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2J1Q9Y385 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2J1Q9Y385 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 KRT18P14-201ENST00000534205 1250 ntBASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 CCDC92B-201ENST00000575506 885 ntBASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 AC019069.1-201ENST00000610008 1333 ntBASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2J1Q9Y385 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2J1Q9Y385 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2J1Q9Y385 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms