Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC142381.4-202ENST00000563973 229 ntBASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDZRN3Q9UPQ7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
PDZRN3Q9UPQ7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 AP006587.3-201ENST00000525742 1516 ntBASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 AC128676.1-201ENST00000454392 318 ntBASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 AL591742.1-201ENST00000604433 565 ntBASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 AC006058.3-201ENST00000606217 1069 ntBASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDZRN3Q9UPQ7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 RPS2P4-201ENST00000476944 856 ntBASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.5■■□□□ 1.83
PDZRN3Q9UPQ7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 AC010980.2-201ENST00000587099 1412 ntBASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PDZRN3Q9UPQ7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDZRN3Q9UPQ7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 AL158047.1-201ENST00000445918 881 ntBASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 AC026366.1-201ENST00000488803 879 ntBASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 AC243732.1-201ENST00000612648 864 ntBASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PDZRN3Q9UPQ7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms