Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 AC010536.3-201ENST00000620306 533 ntBASIC17.72■□□□□ 0.43
TREM2Q9NZC2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TREM2Q9NZC2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 GPX1P1-201ENST00000388829 606 ntBASIC17.71■□□□□ 0.43
TREM2Q9NZC2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 AC231657.2-201ENST00000624556 255 ntBASIC17.71■□□□□ 0.43
TREM2Q9NZC2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TREM2Q9NZC2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TREM2Q9NZC2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TREM2Q9NZC2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.71■□□□□ 0.42
TREM2Q9NZC2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
TREM2Q9NZC2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 AC005181.1-201ENST00000604782 1256 ntBASIC17.7■□□□□ 0.42
TREM2Q9NZC2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.7■□□□□ 0.42
TREM2Q9NZC2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.69■□□□□ 0.42
TREM2Q9NZC2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 TERF1P5-201ENST00000477545 1207 ntBASIC17.68■□□□□ 0.42
TREM2Q9NZC2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 AL049796.1-201ENST00000565336 1766 ntBASIC17.68■□□□□ 0.42
TREM2Q9NZC2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREM2Q9NZC2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.67■□□□□ 0.42
TREM2Q9NZC2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.67■□□□□ 0.42
TREM2Q9NZC2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 AC083906.2-201ENST00000511578 360 ntBASIC17.67■□□□□ 0.42
TREM2Q9NZC2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 AL050303.2-201ENST00000619798 666 ntBASIC17.67■□□□□ 0.42
TREM2Q9NZC2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TREM2Q9NZC2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms