Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 FEM1AP1-201ENST00000431297 1995 ntBASIC19.06■□□□□ 0.64
POLE3Q9NRF9 AC116050.2-201ENST00000612102 1779 ntBASIC19.06■□□□□ 0.64
POLE3Q9NRF9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 LINC01521-201ENST00000504184 1943 ntBASIC19.06■□□□□ 0.64
POLE3Q9NRF9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
POLE3Q9NRF9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 AC019069.1-201ENST00000610008 1333 ntBASIC19.05■□□□□ 0.64
POLE3Q9NRF9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 RBM17P2-201ENST00000616397 1405 ntBASIC19.05■□□□□ 0.64
POLE3Q9NRF9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
POLE3Q9NRF9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 KRT18P61-201ENST00000585825 1298 ntBASIC19.04■□□□□ 0.64
POLE3Q9NRF9 NTF6G-201ENST00000591094 616 ntBASIC19.04■□□□□ 0.64
POLE3Q9NRF9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.04■□□□□ 0.64
POLE3Q9NRF9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 AC027702.1-201ENST00000563810 1770 ntBASIC19.03■□□□□ 0.64
POLE3Q9NRF9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 GABARAPL3-202ENST00000624044 1851 ntBASIC19.03■□□□□ 0.64
POLE3Q9NRF9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLE3Q9NRF9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms