Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.58■■□□□ 1.21
VPS16Q9H269 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS16Q9H269 KRT87P-202ENST00000534226 1464 ntBASIC22.58■■□□□ 1.2
VPS16Q9H269 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
VPS16Q9H269 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
VPS16Q9H269 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
VPS16Q9H269 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
VPS16Q9H269 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 AL121603.2-201ENST00000557373 2117 ntBASIC22.57■■□□□ 1.2
VPS16Q9H269 POU5F1P4-201ENST00000413175 1085 ntBASIC22.57■■□□□ 1.2
VPS16Q9H269 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS16Q9H269 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS16Q9H269 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS16Q9H269 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS16Q9H269 RARRES2P11-201ENST00000635158 484 ntBASIC22.57■■□□□ 1.2
VPS16Q9H269 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS16Q9H269 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS16Q9H269 AL162377.1-201ENST00000618844 1793 ntBASIC22.57■■□□□ 1.2
VPS16Q9H269 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
VPS16Q9H269 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS16Q9H269 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS16Q9H269 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
VPS16Q9H269 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS16Q9H269 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
VPS16Q9H269 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
VPS16Q9H269 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS16Q9H269 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS16Q9H269 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.56■■□□□ 1.2
VPS16Q9H269 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS16Q9H269 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS16Q9H269 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS16Q9H269 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS16Q9H269 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS16Q9H269 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
VPS16Q9H269 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS16Q9H269 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
VPS16Q9H269 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS16Q9H269 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS16Q9H269 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
VPS16Q9H269 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
VPS16Q9H269 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
VPS16Q9H269 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS16Q9H269 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
VPS16Q9H269 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS16Q9H269 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS16Q9H269 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
VPS16Q9H269 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS16Q9H269 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
VPS16Q9H269 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.54■■□□□ 1.2
VPS16Q9H269 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
VPS16Q9H269 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS16Q9H269 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS16Q9H269 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.54■■□□□ 1.2
VPS16Q9H269 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS16Q9H269 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS16Q9H269 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.54■■□□□ 1.2
VPS16Q9H269 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
VPS16Q9H269 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS16Q9H269 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS16Q9H269 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 IRS3P-201ENST00000223076 1006 ntBASIC22.53■■□□□ 1.2
VPS16Q9H269 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS16Q9H269 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.53■■□□□ 1.2
VPS16Q9H269 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.53■■□□□ 1.2
VPS16Q9H269 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
VPS16Q9H269 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
VPS16Q9H269 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS16Q9H269 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
VPS16Q9H269 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
VPS16Q9H269 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms